forked from UTulsa-Research/ag_gen
Adjusting run scripts and config
This commit is contained in:
parent
12a576ad5b
commit
9035b28796
@ -48,19 +48,19 @@ cmake_force:
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SHELL = /bin/sh
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# The CMake executable.
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CMAKE_COMMAND = /usr/bin/cmake
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CMAKE_COMMAND = /storage/home/nschrick/pkg/cmake/3.22.0/bin/cmake
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# The command to remove a file.
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RM = /usr/bin/cmake -E rm -f
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RM = /storage/home/nschrick/pkg/cmake/3.22.0/bin/cmake -E rm -f
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# Escaping for special characters.
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EQUALS = =
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# The top-level source directory on which CMake was run.
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CMAKE_SOURCE_DIR = "/home/noah/Documents/School/Thesis Work/ag_parallel"
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CMAKE_SOURCE_DIR = /home/nschrick/ag_parallel
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# The top-level build directory on which CMake was run.
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CMAKE_BINARY_DIR = "/home/noah/Documents/School/Thesis Work/ag_parallel/build"
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CMAKE_BINARY_DIR = /home/nschrick/ag_parallel/build
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#=============================================================================
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# Targets provided globally by CMake.
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@ -68,7 +68,7 @@ CMAKE_BINARY_DIR = "/home/noah/Documents/School/Thesis Work/ag_parallel/build"
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# Special rule for the target edit_cache
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/usr/bin/ccmake -S$(CMAKE_SOURCE_DIR) -B$(CMAKE_BINARY_DIR)
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@ -78,7 +78,7 @@ edit_cache/fast: edit_cache
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@ -87,9 +87,9 @@ rebuild_cache/fast: rebuild_cache
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@ -116,19 +116,6 @@ depend:
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# Target rules for targets named ag_gen
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@ -142,19 +129,6 @@ ag_gen/fast:
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$(MAKE) $(MAKESILENT) -f CMakeFiles/ag_gen.dir/build.make CMakeFiles/ag_gen.dir/build
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@ -491,30 +465,6 @@ src/mpi/tasks.cpp.s:
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@ -665,7 +615,6 @@ src/util/mem.o: src/util/mem.c.o
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@ -674,7 +623,6 @@ src/util/mem.i: src/util/mem.c.i
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@ -683,7 +631,6 @@ src/util/mem.s: src/util/mem.c.s
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@ -814,9 +761,7 @@ help:
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@echo "... depend"
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@echo "... edit_cache"
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@echo "... rebuild_cache"
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@echo "... doc"
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@ -859,9 +804,6 @@ help:
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BIN
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Binary file not shown.
@ -3,9 +3,10 @@
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#SBATCH --job-name=ag_parallel_ser
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#SBATCH --error=./slurm_reports/job.%J.err
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#SBATCH --nodes=2
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#SBATCH --nodes=4
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#SBATCH --mem=0
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#SBATCH --exclude=compute10
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#SBATCH --exclude=compute02,compute10
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#SBATCH --export=ALL
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export LD_LIBRARY_PATH=/home/nschrick/pkg/postgresql/12.4/lib
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@ -1,142 +1,132 @@
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"command": "/opt/apps/gcc/8.2.0/bin/gcc -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -I/usr/include/postgresql -I/home/nschrick/ag_parallel/src -isystem /home/nschrick/pkg/boost/1.77.0/include -isystem /storage/home/nschrick/pkg/openmpi/4.1.2/include -isystem /home/nschrick/pkg/openmpi/4.1.2/include -g -pthread -o CMakeFiles/ag_gen.dir/src/util/str_array.c.o -c /home/nschrick/ag_parallel/src/util/str_array.c",
|
||||
"file": "/home/nschrick/ag_parallel/src/util/str_array.c"
|
||||
},
|
||||
{
|
||||
"directory": "/home/noah/Documents/School/Thesis Work/ag_parallel/build",
|
||||
"command": "/usr/bin/cc -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -I/usr/include/postgresql -I\"/home/noah/Documents/School/Thesis Work/ag_parallel/src\" -g -pthread -o CMakeFiles/ag_gen.dir/src/util/vector.c.o -c \"/home/noah/Documents/School/Thesis Work/ag_parallel/src/util/vector.c\"",
|
||||
"file": "/home/noah/Documents/School/Thesis Work/ag_parallel/src/util/vector.c"
|
||||
"directory": "/home/nschrick/ag_parallel/build",
|
||||
"command": "/opt/apps/gcc/8.2.0/bin/gcc -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -I/usr/include/postgresql -I/home/nschrick/ag_parallel/src -isystem /home/nschrick/pkg/boost/1.77.0/include -isystem /storage/home/nschrick/pkg/openmpi/4.1.2/include -isystem /home/nschrick/pkg/openmpi/4.1.2/include -g -pthread -o CMakeFiles/ag_gen.dir/src/util/vector.c.o -c /home/nschrick/ag_parallel/src/util/vector.c",
|
||||
"file": "/home/nschrick/ag_parallel/src/util/vector.c"
|
||||
},
|
||||
{
|
||||
"directory": "/home/noah/Documents/School/Thesis Work/ag_parallel/build",
|
||||
"command": "/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -I/usr/include/postgresql -I\"/home/noah/Documents/School/Thesis Work/ag_parallel/src\" -std=c++14 -fopenmp -DREDIS -g -g -O0 -ggdb -Wall -fopenmp -pedantic -pthread -o CMakeFiles/ag_gen.dir/src/mpi/serialize.cpp.o -c \"/home/noah/Documents/School/Thesis Work/ag_parallel/src/mpi/serialize.cpp\"",
|
||||
"file": "/home/noah/Documents/School/Thesis Work/ag_parallel/src/mpi/serialize.cpp"
|
||||
"directory": "/home/nschrick/ag_parallel/build",
|
||||
"command": "/opt/apps/gcc/8.2.0/bin/g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -I/usr/include/postgresql -I/home/nschrick/ag_parallel/src -isystem /home/nschrick/pkg/boost/1.77.0/include -isystem /storage/home/nschrick/pkg/openmpi/4.1.2/include -isystem /home/nschrick/pkg/openmpi/4.1.2/include -std=c++14 -fopenmp -g -g -O0 -ggdb -Wall -fopenmp -pedantic -pthread -o CMakeFiles/ag_gen.dir/src/mpi/serialize.cpp.o -c /home/nschrick/ag_parallel/src/mpi/serialize.cpp",
|
||||
"file": "/home/nschrick/ag_parallel/src/mpi/serialize.cpp"
|
||||
},
|
||||
{
|
||||
"directory": "/home/noah/Documents/School/Thesis Work/ag_parallel/build",
|
||||
"command": "/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -I/usr/include/postgresql -I\"/home/noah/Documents/School/Thesis Work/ag_parallel/src\" -std=c++14 -fopenmp -DREDIS -g -g -O0 -ggdb -Wall -fopenmp -pedantic -pthread -o CMakeFiles/ag_gen.dir/src/mpi/tasks.cpp.o -c \"/home/noah/Documents/School/Thesis Work/ag_parallel/src/mpi/tasks.cpp\"",
|
||||
"file": "/home/noah/Documents/School/Thesis Work/ag_parallel/src/mpi/tasks.cpp"
|
||||
},
|
||||
{
|
||||
"directory": "/home/noah/Documents/School/Thesis Work/ag_parallel/build",
|
||||
"command": "/usr/bin/cc -I/usr/include/postgresql -I\"/home/noah/Documents/School/Thesis Work/ag_parallel/src\" -g -o CMakeFiles/dynstr_test.dir/src/util/mem.c.o -c \"/home/noah/Documents/School/Thesis Work/ag_parallel/src/util/mem.c\"",
|
||||
"file": "/home/noah/Documents/School/Thesis Work/ag_parallel/src/util/mem.c"
|
||||
},
|
||||
{
|
||||
"directory": "/home/noah/Documents/School/Thesis Work/ag_parallel/build",
|
||||
"command": "/usr/bin/cc -I/usr/include/postgresql -I\"/home/noah/Documents/School/Thesis Work/ag_parallel/src\" -g -o CMakeFiles/dynstr_test.dir/src/tests/mem_test.c.o -c \"/home/noah/Documents/School/Thesis Work/ag_parallel/src/tests/mem_test.c\"",
|
||||
"file": "/home/noah/Documents/School/Thesis Work/ag_parallel/src/tests/mem_test.c"
|
||||
"directory": "/home/nschrick/ag_parallel/build",
|
||||
"command": "/opt/apps/gcc/8.2.0/bin/g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -I/usr/include/postgresql -I/home/nschrick/ag_parallel/src -isystem /home/nschrick/pkg/boost/1.77.0/include -isystem /storage/home/nschrick/pkg/openmpi/4.1.2/include -isystem /home/nschrick/pkg/openmpi/4.1.2/include -std=c++14 -fopenmp -g -g -O0 -ggdb -Wall -fopenmp -pedantic -pthread -o CMakeFiles/ag_gen.dir/src/mpi/tasks.cpp.o -c /home/nschrick/ag_parallel/src/mpi/tasks.cpp",
|
||||
"file": "/home/nschrick/ag_parallel/src/mpi/tasks.cpp"
|
||||
}
|
||||
]
|
||||
@ -1,6 +1,6 @@
|
||||
[database]
|
||||
name = ag_gen
|
||||
host = 127.0.0.1
|
||||
port = 5432
|
||||
host = login
|
||||
port = 5420
|
||||
username = ag_gen
|
||||
password = 8PZQc79NUZ3FjqSB
|
||||
|
||||
14
build/run.sh
14
build/run.sh
@ -49,16 +49,24 @@ fi
|
||||
#./ag_gen -n ../fpga_examples/Network_5/car_network5.nm -x ../fpga_examples/Network_5/car_network5.xp -g DOTFILE.dot -t 1 -q 1
|
||||
|
||||
if [ "$TYPE" == "$strval1" ]; then
|
||||
#Old
|
||||
#./ag_gen -n ../Feb_2021/generic_timeline_maintenance.nm -x ../Feb_2021/Sync/"$NUM_SERV"_Serv/sync_timeline_maintenance.xp -g DOTFILE.dot -t 1 -q 1 -p -a 0.9
|
||||
mpirun --mca btl tcp,self --mca btl_tcp_if_include "$ITFC" --mca opal_warn_on_missing_libcuda 0 ./ag_gen -n ../Oct_2021/nm_files/"$CARS"_car_timeline_maintenance.nm -x ../Oct_2021/Sync/4_Exploits/"$NUM_SERV"_Serv/sync_timeline_maintenance.xp -t 1 -q 1 -p -a 0.6 -z "$DBNAME"
|
||||
#Curr
|
||||
#mpirun --mca btl tcp,self --mca btl_tcp_if_include "$ITFC" --mca opal_warn_on_missing_libcuda 0 ./ag_gen -n ../Oct_2021/nm_files/"$CARS"_car_timeline_maintenance.nm -x ../Oct_2021/Sync/4_Exploits/"$NUM_SERV"_Serv/sync_timeline_maintenance.xp -t 1 -q 1 -p -a 0.6 -z "$DBNAME"
|
||||
#Test
|
||||
mpirun --mca btl_openib_allow_ib 1 --mca opal_warn_on_missing_libcuda 0 ./ag_gen -n ../Oct_2021/nm_files/"$CARS"_car_timeline_maintenance.nm -x ../Oct_2021/Sync/4_Exploits/"$NUM_SERV"_Serv/sync_timeline_maintenance.xp -t 1 -q 1 -p -a 0.6 -z "$DBNAME"
|
||||
|
||||
|
||||
elif [ "$TYPE" == "$strval2" ]; then
|
||||
#./ag_gen -n ../Feb_2021/generic_timeline_maintenance.nm -x ../Feb_2021/Non_Sync/"$NUM_SERV"_Serv/generic_timeline_maintenance.xp -g DOTFILE.dot -t 1 -q 1 -p -a 0.9
|
||||
mpirun --mca btl tcp,self --mca btl_tcp_if_include "$ITFC" --mca opal_warn_on_missing_libcuda 0 ./ag_gen -n ../Oct_2021/nm_files/"$CARS"_car_timeline_maintenance.nm -x ../Oct_2021/Non_Sync/4_Exploits/"$NUM_SERV"_Serv/generic_timeline_maintenance.xp -t 1 -q 1 -p -a 0.6 -z "$DBNAME"
|
||||
#Test
|
||||
#mpirun --mca btl tcp,self --mca btl_tcp_if_include "$ITFC" --mca opal_warn_on_missing_libcuda 0 ./ag_gen -n ../Oct_2021/nm_files/"$CARS"_car_timeline_maintenance.nm -x ../Oct_2021/Non_Sync/4_Exploits/"$NUM_SERV"_Serv/generic_timeline_maintenance.xp -t 1 -q 1 -p -a 0.6 -z "$DBNAME"
|
||||
|
||||
mpirun --mca btl_openib_allow_ib 1 --mca opal_warn_on_missing_libcuda 0 ./ag_gen -n ../Oct_2021/nm_files/"$CARS"_car_timeline_maintenance.nm -x ../Oct_2021/Sync/4_Exploits/"$NUM_SERV"_Serv/sync_timeline_maintenance.xp -t 1 -q 1 -p -a 0.6 -z "$DBNAME"
|
||||
|
||||
else
|
||||
echo "Running default."
|
||||
mpirun --mca btl tcp,self --mca btl_tcp_if_include "$ITFC" --mca opal_warn_on_missing_libcuda 0 ./ag_gen -n ../Oct_2021/nm_files/1_car_timeline_maintenance.nm -x ../Oct_2021/Sync/4_Exploits/1_Serv/sync_timeline_maintenance.xp -t 1 -q 1 -p -a 0.6 -z "$DBNAME"
|
||||
mpirun --mca btl_openib_allow_ib 1 --mca opal_warn_on_missing_libcuda 0 ./ag_gen -n ../Oct_2021/nm_files/1_car_timeline_maintenance.nm -x ../Oct_2021/Sync/4_Exploits/1_Serv/sync_timeline_maintenance.xp -t 1 -q 1 -p -a 0.6 -z "$DBNAME"
|
||||
|
||||
fi
|
||||
|
||||
|
||||
191
build/slurm_reports/job.29742.err
Normal file
191
build/slurm_reports/job.29742.err
Normal file
@ -0,0 +1,191 @@
|
||||
terminate called after throwing an instance of 'DBException'
|
||||
terminate called after throwing an instance of 'DBException'
|
||||
what(): Database connection failed: dbname=tmp user=ag_gen host=login port=5420 password=8PZQc79NUZ3FjqSB
|
||||
could not connect to server: Connection refused
|
||||
Is the server running on host "login" (10.1.100.100) and accepting
|
||||
TCP/IP connections on port 5420?
|
||||
|
||||
what(): Database connection failed: dbname=tmp user=ag_gen host=login port=5420 password=8PZQc79NUZ3FjqSB
|
||||
could not connect to server: Connection refused
|
||||
Is the server running on host "login" (10.1.100.100) and accepting
|
||||
TCP/IP connections on port 5420?
|
||||
|
||||
[compute03:25307] *** Process received signal ***
|
||||
[compute03:25307] Signal: Aborted (6)
|
||||
[compute03:25307] Signal code: (-6)
|
||||
[compute03:25306] *** Process received signal ***
|
||||
[compute03:25306] Signal: Aborted (6)
|
||||
[compute03:25306] Signal code: (-6)
|
||||
[compute03:25307] [ 0] /lib64/libpthread.so.0(+0xf7e0)[0x7f9d3a1677e0]
|
||||
[compute03:25307] [ 1] terminate called after throwing an instance of 'DBException'
|
||||
[compute03:25306] [ 0] /lib64/libpthread.so.0(+0xf7e0)[0x7f6f98b587e0]
|
||||
[compute03:25306] [ 1] /lib64/libc.so.6(gsignal+0x35)[0x7f9d39df6495]
|
||||
[compute03:25307] [ 2] /lib64/libc.so.6(gsignal+0x35)[0x7f6f987e7495]
|
||||
[compute03:25306] [ 2] terminate called after throwing an instance of 'DBException'
|
||||
what(): Database connection failed: dbname=tmp user=ag_gen host=login port=5420 password=8PZQc79NUZ3FjqSB
|
||||
could not connect to server: Connection refused
|
||||
Is the server running on host "login" (10.1.100.100) and accepting
|
||||
TCP/IP connections on port 5420?
|
||||
|
||||
[compute04:24809] *** Process received signal ***
|
||||
/lib64/libc.so.6(abort+0x175)[0x7f9d39df7c75]
|
||||
[compute03:25307] [ 3] /lib64/libc.so.6(abort+0x175)[0x7f6f987e8c75]
|
||||
[compute03:25306] [ 3] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x915c2)[0x7f9d3aace5c2]
|
||||
[compute03:25307] [ 4] what(): Database connection failed: dbname=tmp user=ag_gen host=login port=5420 password=8PZQc79NUZ3FjqSB
|
||||
could not connect to server: Connection refused
|
||||
Is the server running on host "login" (10.1.100.100) and accepting
|
||||
TCP/IP connections on port 5420?
|
||||
|
||||
[compute04:24810] *** Process received signal ***
|
||||
[compute04:24810] Signal: Aborted (6)
|
||||
[compute04:24810] Signal code: (-6)
|
||||
/opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x8f4a6)[0x7f9d3aacc4a6]
|
||||
[compute03:25307] [ 5] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x915c2)[0x7f6f994bf5c2]
|
||||
[compute03:25306] [ 4] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x8f4e1)[0x7f9d3aacc4e1]
|
||||
[compute03:25307] [ 6] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x8f4a6)[0x7f6f994bd4a6]
|
||||
[compute03:25306] [ 5] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x8f723)[0x7f9d3aacc723]
|
||||
[compute03:25307] [ 7] [compute04:24809] Signal: Aborted (6)
|
||||
[compute04:24809] Signal code: (-6)
|
||||
[compute04:24809] [ 0] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x8f4e1)[0x7f6f994bd4e1]
|
||||
[compute03:25306] [ 6] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x8f723)[0x7f6f994bd723]
|
||||
[compute03:25306] [ 7] [compute04:24810] [ 0] /lib64/libpthread.so.0(+0xf7e0)[0x7f88c631b7e0]
|
||||
[compute04:24810] [ 1] /lib64/libc.so.6(gsignal+0x35)[0x7f88c5faa495]
|
||||
[compute04:24810] [ 2] ./ag_gen(_ZN10Connection7connectERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE+0x15e)[0x63cb74]
|
||||
[compute03:25307] [ 8] /lib64/libpthread.so.0(+0xf7e0)[0x7f93996627e0]
|
||||
[compute04:24809] [ 1] /lib64/libc.so.6(gsignal+0x35)[0x7f93992f1495]
|
||||
[compute04:24809] [ 2] /lib64/libc.so.6(abort+0x175)[0x7f93992f2c75]
|
||||
./ag_gen(_ZN10Connection7connectERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE+0x15e)[0x63cb74]
|
||||
[compute03:25306] [ 8] ./ag_gen(_ZN2DB7connectERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE+0x23)[0x63d10b]
|
||||
[compute03:25307] [ 9] /lib64/libc.so.6(abort+0x175)[0x7f88c5fabc75]
|
||||
[compute04:24810] [ 3] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x915c2)[0x7f88c6c825c2]
|
||||
[compute04:24810] [ 4] [compute04:24809] [ 3] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x915c2)[0x7f9399fc95c2]
|
||||
[compute04:24809] [ 4] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x8f4a6)[0x7f88c6c804a6]
|
||||
[compute04:24810] [ 5] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x8f4e1)[0x7f88c6c804e1]
|
||||
[compute04:24810] [ 6] ./ag_gen(_ZN2DB7connectERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE+0x23)[0x63d10b]
|
||||
[compute03:25306] [ 9] ./ag_gen(_Z7init_dbNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE+0x1d)[0x634ab5]
|
||||
[compute03:25307] [10] ./ag_gen(main+0x7e8)[0x5c2d8e]
|
||||
[compute03:25307] [11] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x8f4a6)[0x7f9399fc74a6]
|
||||
[compute04:24809] [ 5] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x8f4e1)[0x7f9399fc74e1]
|
||||
[compute04:24809] [ 6] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x8f723)[0x7f9399fc7723]
|
||||
[compute04:24809] [ 7] /lib64/libc.so.6(__libc_start_main+0xfd)[0x7f9d39de2d1d]
|
||||
[compute03:25307] [12] ./ag_gen[0x5c0c49]
|
||||
[compute03:25307] *** End of error message ***
|
||||
/opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x8f723)[0x7f88c6c80723]
|
||||
[compute04:24810] [ 7] ./ag_gen(_Z7init_dbNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE+0x1d)[0x634ab5]
|
||||
[compute03:25306] [10] ./ag_gen(main+0x7e8)[0x5c2d8e]
|
||||
[compute03:25306] [11] ./ag_gen(_ZN10Connection7connectERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE+0x15e)[0x63cb74]
|
||||
[compute04:24809] [ 8] /lib64/libc.so.6(__libc_start_main+0xfd)[0x7f6f987d3d1d]
|
||||
[compute03:25306] [12] ./ag_gen(_ZN10Connection7connectERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE+0x15e)[0x63cb74]
|
||||
[compute04:24810] [ 8] terminate called after throwing an instance of 'DBException'
|
||||
./ag_gen[0x5c0c49]
|
||||
[compute03:25306] *** End of error message ***
|
||||
terminate called after throwing an instance of 'DBException'
|
||||
./ag_gen(_ZN2DB7connectERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE+0x23)[0x63d10b]
|
||||
[compute04:24809] [ 9] terminate called after throwing an instance of 'DBException'
|
||||
what(): Database connection failed: dbname=tmp user=ag_gen host=login port=5420 password=8PZQc79NUZ3FjqSB
|
||||
could not connect to server: Connection refused
|
||||
Is the server running on host "login" (10.1.100.100) and accepting
|
||||
TCP/IP connections on port 5420?
|
||||
|
||||
terminate called after throwing an instance of 'DBException'
|
||||
what(): Database connection failed: dbname=tmp user=ag_gen host=login port=5420 password=8PZQc79NUZ3FjqSB
|
||||
could not connect to server: Connection refused
|
||||
Is the server running on host "login" (10.1.100.100) and accepting
|
||||
TCP/IP connections on port 5420?
|
||||
|
||||
./ag_gen(_ZN2DB7connectERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE+0x23)[0x63d10b]
|
||||
[compute04:24810] [ 9] what(): Database connection failed: dbname=tmp user=ag_gen host=login port=5420 password=8PZQc79NUZ3FjqSB
|
||||
could not connect to server: Connection refused
|
||||
Is the server running on host "login" (10.1.100.100) and accepting
|
||||
TCP/IP connections on port 5420?
|
||||
|
||||
[compute06:24528] *** Process received signal ***
|
||||
[compute06:24528] Signal: Aborted (6)
|
||||
[compute06:24528] Signal code: (-6)
|
||||
what(): Database connection failed: dbname=tmp user=ag_gen host=login port=5420 password=8PZQc79NUZ3FjqSB
|
||||
could not connect to server: Connection refused
|
||||
Is the server running on host "login" (10.1.100.100) and accepting
|
||||
TCP/IP connections on port 5420?
|
||||
|
||||
[compute05:24497] *** Process received signal ***
|
||||
[compute05:24497] Signal: Aborted (6)
|
||||
[compute05:24497] Signal code: (-6)
|
||||
./ag_gen(_Z7init_dbNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE+0x1d)[0x634ab5]
|
||||
[compute04:24809] [10] [compute06:24527] *** Process received signal ***
|
||||
[compute06:24527] Signal: Aborted (6)
|
||||
[compute06:24527] Signal code: (-6)
|
||||
[compute05:24496] *** Process received signal ***
|
||||
[compute05:24496] Signal: Aborted (6)
|
||||
[compute05:24496] Signal code: (-6)
|
||||
./ag_gen(_Z7init_dbNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE+0x1d)[0x634ab5]
|
||||
[compute04:24810] [10] [compute06:24528] [ 0] /lib64/libpthread.so.0(+0xf7e0)[0x7f86803b07e0]
|
||||
[compute06:24528] [ 1] [compute05:24497] [ 0] /lib64/libpthread.so.0(+0xf7e0)[0x7f1aef7697e0]
|
||||
./ag_gen(main+0x7e8)[0x5c2d8e]
|
||||
[compute04:24809] [11] /lib64/libc.so.6(__libc_start_main+0xfd)[0x7f93992ddd1d]
|
||||
[compute04:24809] [12] [compute06:24527] [ 0] /lib64/libpthread.so.0(+0xf7e0)[0x7fe3588c97e0]
|
||||
[compute06:24527] [ 1] [compute05:24496] [ 0] /lib64/libpthread.so.0(+0xf7e0)[0x7fba08a7e7e0]
|
||||
[compute05:24496] [ 1] ./ag_gen(main+0x7e8)[0x5c2d8e]
|
||||
[compute04:24810] [11] /lib64/libc.so.6(__libc_start_main+0xfd)[0x7f88c5f96d1d]
|
||||
[compute04:24810] [12] /lib64/libc.so.6(gsignal+0x35)[0x7f868003f495]
|
||||
[compute06:24528] [ 2] [compute05:24497] [ 1] /lib64/libc.so.6(gsignal+0x35)[0x7f1aef3f8495]
|
||||
[compute05:24497] [ 2] ./ag_gen[0x5c0c49]
|
||||
[compute04:24809] *** End of error message ***
|
||||
/lib64/libc.so.6(gsignal+0x35)[0x7fe358558495]
|
||||
[compute06:24527] [ 2] /lib64/libc.so.6(abort+0x175)[0x7fe358559c75]
|
||||
[compute06:24527] [ 3] /lib64/libc.so.6(gsignal+0x35)[0x7fba0870d495]
|
||||
[compute05:24496] [ 2] /lib64/libc.so.6(abort+0x175)[0x7fba0870ec75]
|
||||
[compute05:24496] [ 3] ./ag_gen[0x5c0c49]
|
||||
[compute04:24810] *** End of error message ***
|
||||
/lib64/libc.so.6(abort+0x175)[0x7f8680040c75]
|
||||
[compute06:24528] [ 3] /lib64/libc.so.6(abort+0x175)[0x7f1aef3f9c75]
|
||||
[compute05:24497] [ 3] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x915c2)[0x7fe3592305c2]
|
||||
[compute06:24527] [ 4] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x915c2)[0x7fba093e55c2]
|
||||
[compute05:24496] [ 4] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x915c2)[0x7f8680d175c2]
|
||||
[compute06:24528] [ 4] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x8f4a6)[0x7f8680d154a6]
|
||||
[compute06:24528] [ 5] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x915c2)[0x7f1af00d05c2]
|
||||
[compute05:24497] [ 4] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x8f4a6)[0x7f1af00ce4a6]
|
||||
[compute05:24497] [ 5] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x8f4a6)[0x7fe35922e4a6]
|
||||
[compute06:24527] [ 5] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x8f4a6)[0x7fba093e34a6]
|
||||
[compute05:24496] [ 5] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x8f4e1)[0x7fba093e34e1]
|
||||
[compute05:24496] [ 6] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x8f4e1)[0x7f8680d154e1]
|
||||
[compute06:24528] [ 6] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x8f723)[0x7f8680d15723]
|
||||
[compute06:24528] [ 7] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x8f4e1)[0x7f1af00ce4e1]
|
||||
[compute05:24497] [ 6] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x8f723)[0x7f1af00ce723]
|
||||
[compute05:24497] [ 7] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x8f4e1)[0x7fe35922e4e1]
|
||||
[compute06:24527] [ 6] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x8f723)[0x7fe35922e723]
|
||||
[compute06:24527] [ 7] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x8f723)[0x7fba093e3723]
|
||||
[compute05:24496] [ 7] ./ag_gen(_ZN10Connection7connectERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE+0x15e)[0x63cb74]
|
||||
[compute06:24528] [ 8] ./ag_gen(_ZN10Connection7connectERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE+0x15e)[0x63cb74]
|
||||
[compute05:24497] [ 8] ./ag_gen(_ZN10Connection7connectERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE+0x15e)[0x63cb74]
|
||||
[compute06:24527] [ 8] ./ag_gen(_ZN10Connection7connectERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE+0x15e)[0x63cb74]
|
||||
[compute05:24496] [ 8] ./ag_gen(_ZN2DB7connectERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE+0x23)[0x63d10b]
|
||||
[compute06:24528] [ 9] ./ag_gen(_ZN2DB7connectERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE+0x23)[0x63d10b]
|
||||
[compute05:24497] [ 9] ./ag_gen(_ZN2DB7connectERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE+0x23)[0x63d10b]
|
||||
[compute06:24527] [ 9] ./ag_gen(_ZN2DB7connectERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE+0x23)[0x63d10b]
|
||||
[compute05:24496] [ 9] ./ag_gen(_Z7init_dbNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE+0x1d)[0x634ab5]
|
||||
[compute06:24528] [10] ./ag_gen(_Z7init_dbNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE+0x1d)[0x634ab5]
|
||||
[compute05:24497] [10] ./ag_gen(main+0x7e8)[0x5c2d8e]
|
||||
[compute06:24528] [11] ./ag_gen(main+0x7e8)[0x5c2d8e]
|
||||
[compute05:24497] [11] ./ag_gen(_Z7init_dbNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE+0x1d)[0x634ab5]
|
||||
[compute06:24527] [10] ./ag_gen(_Z7init_dbNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE+0x1d)[0x634ab5]
|
||||
[compute05:24496] [10] /lib64/libc.so.6(__libc_start_main+0xfd)[0x7f868002bd1d]
|
||||
[compute06:24528] [12] /lib64/libc.so.6(__libc_start_main+0xfd)[0x7f1aef3e4d1d]
|
||||
[compute05:24497] [12] ./ag_gen[0x5c0c49]
|
||||
[compute06:24528] *** End of error message ***
|
||||
./ag_gen[0x5c0c49]
|
||||
[compute05:24497] *** End of error message ***
|
||||
./ag_gen(main+0x7e8)[0x5c2d8e]
|
||||
[compute06:24527] [11] /lib64/libc.so.6(__libc_start_main+0xfd)[0x7fe358544d1d]
|
||||
[compute06:24527] [12] ./ag_gen(main+0x7e8)[0x5c2d8e]
|
||||
[compute05:24496] [11] ./ag_gen[0x5c0c49]
|
||||
[compute06:24527] *** End of error message ***
|
||||
/lib64/libc.so.6(__libc_start_main+0xfd)[0x7fba086f9d1d]
|
||||
[compute05:24496] [12] ./ag_gen[0x5c0c49]
|
||||
[compute05:24496] *** End of error message ***
|
||||
--------------------------------------------------------------------------
|
||||
Primary job terminated normally, but 1 process returned
|
||||
a non-zero exit code. Per user-direction, the job has been aborted.
|
||||
--------------------------------------------------------------------------
|
||||
--------------------------------------------------------------------------
|
||||
mpirun noticed that process rank 0 with PID 0 on node compute03 exited on signal 6 (Aborted).
|
||||
--------------------------------------------------------------------------
|
||||
Loading…
x
Reference in New Issue
Block a user