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hammer 2022-01-28 23:11:21 -06:00
parent ba59667173
commit 5558691823
80 changed files with 734 additions and 155 deletions
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74
build/Makefile
View File

@ -48,19 +48,19 @@ cmake_force:
SHELL = /bin/sh
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@ -68,7 +68,7 @@ CMAKE_BINARY_DIR = "/home/noah/Documents/School/Thesis Work/ag_parallel/build"
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@ -814,9 +761,7 @@ help:
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@ -859,9 +804,6 @@ help:
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BIN
build/ag_gen
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Binary file not shown.

3
build/ag_run.sh
View File

@ -15,6 +15,7 @@ NUM_SERV=${1:-1}
TYPE=${2:-sync}
CARS=${3:-2}
DBNAME=${4:-tmp}
NODES=${5:-2}
module load graphviz
module load gcc
@ -22,4 +23,4 @@ module load openmpi
module load cmake
module load postgresql/12.4
./run.sh "$NUM_SERV" "$TYPE" "$CARS" "$DBNAME"
./run.sh "$NUM_SERV" "$TYPE" "$CARS" "$DBNAME" "$NODES"

166
build/compile_commands.json
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@ -1,142 +1,132 @@
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build/slurm_reports/4_Exploit/job.29837.err Normal file
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0
build/slurm_reports/4_Exploit/job.29838.err Normal file
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0
build/slurm_reports/4_Exploit/job.29839.err Normal file
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0
build/slurm_reports/4_Exploit/job.29840.err Normal file
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0
build/slurm_reports/4_Exploit/job.29841.err Normal file
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0
build/slurm_reports/4_Exploit/job.29842.err Normal file
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0
build/slurm_reports/4_Exploit/job.29843.err Normal file
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0
build/slurm_reports/4_Exploit/job.29844.err Normal file
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0
build/slurm_reports/4_Exploit/job.29845.err Normal file
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0
build/slurm_reports/4_Exploit/job.29846.err Normal file
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2
build/slurm_reports/4_Exploit/job.29869.err Normal file
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@ -0,0 +1,2 @@
WARNING: could not remove file or directory "base/144615": Directory not empty
WARNING: some useless files may be left behind in old database directory "base/144615"

0
build/slurm_reports/4_Exploit/job.29870.err Normal file
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37
build/slurm_reports/4_Exploit/job.29892.err Normal file
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@ -0,0 +1,37 @@
WARNING: could not remove file or directory "base/144841": Directory not empty
WARNING: some useless files may be left behind in old database directory "base/144841"
terminate called after throwing an instance of 'std::bad_alloc'
what(): std::bad_alloc
[compute05:01855] *** Process received signal ***
[compute05:01855] Signal: Aborted (6)
[compute05:01855] Signal code: (-6)
[compute05:01855] [ 0] /lib64/libpthread.so.0(+0xf7e0)[0x7fa3545527e0]
[compute05:01855] [ 1] /lib64/libc.so.6(gsignal+0x35)[0x7fa3541e1495]
[compute05:01855] [ 2] /lib64/libc.so.6(abort+0x175)[0x7fa3541e2c75]
[compute05:01855] [ 3] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x915c2)[0x7fa354eb95c2]
[compute05:01855] [ 4] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x8f4a6)[0x7fa354eb74a6]
[compute05:01855] [ 5] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x8e469)[0x7fa354eb6469]
[compute05:01855] [ 6] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(__gxx_personality_v0+0x2c5)[0x7fa354eb6e25]
[compute05:01855] [ 7] /opt/apps/gcc/8.2.0/lib64/libgcc_s.so.1(+0x104c3)[0x7fa3547704c3]
[compute05:01855] [ 8] /opt/apps/gcc/8.2.0/lib64/libgcc_s.so.1(_Unwind_RaiseException+0x2b1)[0x7fa354770a21]
[compute05:01855] [ 9] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(__cxa_throw+0x36)[0x7fa354eb7716]
[compute05:01855] [10] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x8fbec)[0x7fa354eb7bec]
[compute05:01855] [11] ./ag_gen(_ZN9__gnu_cxx13new_allocatorI4EdgeE8allocateEmPKv+0x4a)[0x5e1616]
[compute05:01855] [12] ./ag_gen(_ZNSt16allocator_traitsISaI4EdgeEE8allocateERS1_m+0x28)[0x5db6f3]
[compute05:01855] [13] ./ag_gen(_ZNSt12_Vector_baseI4EdgeSaIS0_EE11_M_allocateEm+0x2a)[0x5d5858]
[compute05:01855] [14] ./ag_gen(_ZNSt6vectorI4EdgeSaIS0_EE17_M_realloc_insertIJRKS0_EEEvN9__gnu_cxx17__normal_iteratorIPS0_S2_EEDpOT_+0x80)[0x621bb4]
[compute05:01855] [15] ./ag_gen(_ZNSt6vectorI4EdgeSaIS0_EE9push_backERKS0_+0x7b)[0x61d891]
[compute05:01855] [16] ./ag_gen[0x61833a]
[compute05:01855] [17] /opt/apps/gcc/8.2.0/lib64/libgomp.so.1(GOMP_parallel+0x3f)[0x7fa354984c5f]
[compute05:01855] [18] ./ag_gen(_ZN5AGGen8generateEbiiidRN5boost3mpi12communicatorE+0x54b)[0x6177b9]
[compute05:01855] [19] ./ag_gen(main+0x11f7)[0x5c3b4d]
[compute05:01855] [20] /lib64/libc.so.6(__libc_start_main+0xfd)[0x7fa3541cdd1d]
[compute05:01855] [21] ./ag_gen[0x5c0ff9]
[compute05:01855] *** End of error message ***
--------------------------------------------------------------------------
Primary job terminated normally, but 1 process returned
a non-zero exit code. Per user-direction, the job has been aborted.
--------------------------------------------------------------------------
--------------------------------------------------------------------------
mpirun noticed that process rank 0 with PID 1855 on node compute05 exited on signal 6 (Aborted).
--------------------------------------------------------------------------

33
build/slurm_reports/4_Exploit/job.29893.err Normal file
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@ -0,0 +1,33 @@
terminate called after throwing an instance of 'std::bad_alloc'
what(): std::bad_alloc
[compute04:02500] *** Process received signal ***
[compute04:02500] Signal: Aborted (6)
[compute04:02500] Signal code: (-6)
[compute04:02500] [ 0] /lib64/libpthread.so.0(+0xf7e0)[0x7f0c1f7c87e0]
[compute04:02500] [ 1] /lib64/libc.so.6(gsignal+0x35)[0x7f0c1f457495]
[compute04:02500] [ 2] /lib64/libc.so.6(abort+0x175)[0x7f0c1f458c75]
[compute04:02500] [ 3] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x915c2)[0x7f0c2012f5c2]
[compute04:02500] [ 4] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x8f4a6)[0x7f0c2012d4a6]
[compute04:02500] [ 5] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x8e469)[0x7f0c2012c469]
[compute04:02500] [ 6] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(__gxx_personality_v0+0x2c5)[0x7f0c2012ce25]
[compute04:02500] [ 7] /opt/apps/gcc/8.2.0/lib64/libgcc_s.so.1(+0x104c3)[0x7f0c1f9e64c3]
[compute04:02500] [ 8] /opt/apps/gcc/8.2.0/lib64/libgcc_s.so.1(_Unwind_RaiseException+0x2b1)[0x7f0c1f9e6a21]
[compute04:02500] [ 9] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(__cxa_throw+0x36)[0x7f0c2012d716]
[compute04:02500] [10] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x8fbec)[0x7f0c2012dbec]
[compute04:02500] [11] ./ag_gen(_ZN9__gnu_cxx13new_allocatorI4EdgeE8allocateEmPKv+0x4a)[0x5e1616]
[compute04:02500] [12] ./ag_gen(_ZNSt16allocator_traitsISaI4EdgeEE8allocateERS1_m+0x28)[0x5db6f3]
[compute04:02500] [13] ./ag_gen(_ZNSt12_Vector_baseI4EdgeSaIS0_EE11_M_allocateEm+0x2a)[0x5d5858]
[compute04:02500] [14] ./ag_gen(_ZNSt6vectorI4EdgeSaIS0_EE17_M_realloc_insertIJRKS0_EEEvN9__gnu_cxx17__normal_iteratorIPS0_S2_EEDpOT_+0x80)[0x621bb4]
[compute04:02500] [15] ./ag_gen(_ZNSt6vectorI4EdgeSaIS0_EE9push_backERKS0_+0x7b)[0x61d891]
[compute04:02500] [16] ./ag_gen[0x61833a]
[compute04:02500] [17] /opt/apps/gcc/8.2.0/lib64/libgomp.so.1(+0x1658e)[0x7f0c1fc0358e]
[compute04:02500] [18] /lib64/libpthread.so.0(+0x7aa1)[0x7f0c1f7c0aa1]
[compute04:02500] [19] /lib64/libc.so.6(clone+0x6d)[0x7f0c1f50dbcd]
[compute04:02500] *** End of error message ***
--------------------------------------------------------------------------
Primary job terminated normally, but 1 process returned
a non-zero exit code. Per user-direction, the job has been aborted.
--------------------------------------------------------------------------
--------------------------------------------------------------------------
mpirun noticed that process rank 0 with PID 2500 on node compute04 exited on signal 6 (Aborted).
--------------------------------------------------------------------------

35
build/slurm_reports/4_Exploit/job.29911.err Normal file
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@ -0,0 +1,35 @@
terminate called after throwing an instance of 'std::bad_alloc'
what(): std::bad_alloc
[compute05:15509] *** Process received signal ***
[compute05:15509] Signal: Aborted (6)
[compute05:15509] Signal code: (-6)
[compute05:15509] [ 0] /lib64/libpthread.so.0(+0xf7e0)[0x7fe4174a77e0]
[compute05:15509] [ 1] /lib64/libc.so.6(gsignal+0x35)[0x7fe417136495]
[compute05:15509] [ 2] /lib64/libc.so.6(abort+0x175)[0x7fe417137c75]
[compute05:15509] [ 3] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x915c2)[0x7fe417e0e5c2]
[compute05:15509] [ 4] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x8f4a6)[0x7fe417e0c4a6]
[compute05:15509] [ 5] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x8e469)[0x7fe417e0b469]
[compute05:15509] [ 6] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(__gxx_personality_v0+0x2c5)[0x7fe417e0be25]
[compute05:15509] [ 7] /opt/apps/gcc/8.2.0/lib64/libgcc_s.so.1(+0x104c3)[0x7fe4176c54c3]
[compute05:15509] [ 8] /opt/apps/gcc/8.2.0/lib64/libgcc_s.so.1(_Unwind_RaiseException+0x2b1)[0x7fe4176c5a21]
[compute05:15509] [ 9] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(__cxa_throw+0x36)[0x7fe417e0c716]
[compute05:15509] [10] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x8fbec)[0x7fe417e0cbec]
[compute05:15509] [11] ./ag_gen(_ZN9__gnu_cxx13new_allocatorI4EdgeE8allocateEmPKv+0x4a)[0x5e1616]
[compute05:15509] [12] ./ag_gen(_ZNSt16allocator_traitsISaI4EdgeEE8allocateERS1_m+0x28)[0x5db6f3]
[compute05:15509] [13] ./ag_gen(_ZNSt12_Vector_baseI4EdgeSaIS0_EE11_M_allocateEm+0x2a)[0x5d5858]
[compute05:15509] [14] ./ag_gen(_ZNSt6vectorI4EdgeSaIS0_EE17_M_realloc_insertIJRKS0_EEEvN9__gnu_cxx17__normal_iteratorIPS0_S2_EEDpOT_+0x80)[0x621bb4]
[compute05:15509] [15] ./ag_gen(_ZNSt6vectorI4EdgeSaIS0_EE9push_backERKS0_+0x7b)[0x61d891]
[compute05:15509] [16] ./ag_gen[0x61833a]
[compute05:15509] [17] /opt/apps/gcc/8.2.0/lib64/libgomp.so.1(GOMP_parallel+0x3f)[0x7fe4178d9c5f]
[compute05:15509] [18] ./ag_gen(_ZN5AGGen8generateEbiiidRN5boost3mpi12communicatorE+0x54b)[0x6177b9]
[compute05:15509] [19] ./ag_gen(main+0x11f7)[0x5c3b4d]
[compute05:15509] [20] /lib64/libc.so.6(__libc_start_main+0xfd)[0x7fe417122d1d]
[compute05:15509] [21] ./ag_gen[0x5c0ff9]
[compute05:15509] *** End of error message ***
--------------------------------------------------------------------------
Primary job terminated normally, but 1 process returned
a non-zero exit code. Per user-direction, the job has been aborted.
--------------------------------------------------------------------------
--------------------------------------------------------------------------
mpirun noticed that process rank 0 with PID 15509 on node compute05 exited on signal 6 (Aborted).
--------------------------------------------------------------------------

33
build/slurm_reports/4_Exploit/job.29912.err Normal file
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@ -0,0 +1,33 @@
terminate called after throwing an instance of 'std::bad_alloc'
what(): std::bad_alloc
[compute04:31612] *** Process received signal ***
[compute04:31612] Signal: Aborted (6)
[compute04:31612] Signal code: (-6)
[compute04:31612] [ 0] /lib64/libpthread.so.0(+0xf7e0)[0x7f6ef45907e0]
[compute04:31612] [ 1] /lib64/libc.so.6(gsignal+0x35)[0x7f6ef421f495]
[compute04:31612] [ 2] /lib64/libc.so.6(abort+0x175)[0x7f6ef4220c75]
[compute04:31612] [ 3] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x915c2)[0x7f6ef4ef75c2]
[compute04:31612] [ 4] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x8f4a6)[0x7f6ef4ef54a6]
[compute04:31612] [ 5] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x8e469)[0x7f6ef4ef4469]
[compute04:31612] [ 6] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(__gxx_personality_v0+0x2c5)[0x7f6ef4ef4e25]
[compute04:31612] [ 7] /opt/apps/gcc/8.2.0/lib64/libgcc_s.so.1(+0x104c3)[0x7f6ef47ae4c3]
[compute04:31612] [ 8] /opt/apps/gcc/8.2.0/lib64/libgcc_s.so.1(_Unwind_RaiseException+0x2b1)[0x7f6ef47aea21]
[compute04:31612] [ 9] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(__cxa_throw+0x36)[0x7f6ef4ef5716]
[compute04:31612] [10] /opt/apps/gcc/8.2.0/lib64/libstdc++.so.6(+0x8fbec)[0x7f6ef4ef5bec]
[compute04:31612] [11] ./ag_gen(_ZN9__gnu_cxx13new_allocatorI4EdgeE8allocateEmPKv+0x4a)[0x5e1616]
[compute04:31612] [12] ./ag_gen(_ZNSt16allocator_traitsISaI4EdgeEE8allocateERS1_m+0x28)[0x5db6f3]
[compute04:31612] [13] ./ag_gen(_ZNSt12_Vector_baseI4EdgeSaIS0_EE11_M_allocateEm+0x2a)[0x5d5858]
[compute04:31612] [14] ./ag_gen(_ZNSt6vectorI4EdgeSaIS0_EE17_M_realloc_insertIJRKS0_EEEvN9__gnu_cxx17__normal_iteratorIPS0_S2_EEDpOT_+0x80)[0x621bb4]
[compute04:31612] [15] ./ag_gen(_ZNSt6vectorI4EdgeSaIS0_EE9push_backERKS0_+0x7b)[0x61d891]
[compute04:31612] [16] ./ag_gen[0x61833a]
[compute04:31612] [17] /opt/apps/gcc/8.2.0/lib64/libgomp.so.1(+0x1658e)[0x7f6ef49cb58e]
[compute04:31612] [18] /lib64/libpthread.so.0(+0x7aa1)[0x7f6ef4588aa1]
[compute04:31612] [19] /lib64/libc.so.6(clone+0x6d)[0x7f6ef42d5bcd]
[compute04:31612] *** End of error message ***
--------------------------------------------------------------------------
Primary job terminated normally, but 1 process returned
a non-zero exit code. Per user-direction, the job has been aborted.
--------------------------------------------------------------------------
--------------------------------------------------------------------------
mpirun noticed that process rank 0 with PID 31612 on node compute04 exited on signal 6 (Aborted).
--------------------------------------------------------------------------

0
build/slurm_reports/4_Exploit/job.29913.err Normal file
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2
build/slurm_reports/4_Exploit/job.29914.err Normal file
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@ -0,0 +1,2 @@
WARNING: could not remove file or directory "base/146121": Directory not empty
WARNING: some useless files may be left behind in old database directory "base/146121"

0
build/slurm_reports/4_Exploit/job.29915.err Normal file
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0
build/slurm_reports/4_Exploit/job.29916.err Normal file
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0
build/slurm_reports/4_Exploit/job.29917.err Normal file
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0
build/slurm_reports/4_Exploit/job.29918.err Normal file
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0
build/slurm_reports/4_Exploit/job.29919.err Normal file
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0
build/slurm_reports/4_Exploit/job.29920.err Normal file
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0
build/slurm_reports/4_Exploit/job.29921.err Normal file
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2
build/slurm_reports/4_Exploit/job.29922.err Normal file
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@ -0,0 +1,2 @@
WARNING: could not remove file or directory "base/147302": Directory not empty
WARNING: some useless files may be left behind in old database directory "base/147302"

0
build/slurm_reports/4_Exploit/job.29923.err Normal file
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2
build/slurm_reports/4_Exploit/job.29924.err Normal file
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@ -0,0 +1,2 @@
WARNING: could not remove file or directory "base/147641": Directory not empty
WARNING: some useless files may be left behind in old database directory "base/147641"

2
build/slurm_reports/4_Exploit/job.29925.err Normal file
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@ -0,0 +1,2 @@
WARNING: could not remove file or directory "base/147809": Directory not empty
WARNING: some useless files may be left behind in old database directory "base/147809"

0
build/slurm_reports/4_Exploit/job.29926.err Normal file
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0
build/slurm_reports/4_Exploit/job.29927.err Normal file
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2
build/slurm_reports/4_Exploit/job.29928.err Normal file
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@ -0,0 +1,2 @@
mpirun: Forwarding signal 18 to job
slurmstepd: *** JOB 29928 ON compute05 CANCELLED AT 2022-01-28T22:29:28 ***

2
build/slurm_reports/4_Exploit/job.29929.err Normal file
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@ -0,0 +1,2 @@
WARNING: could not remove file or directory "base/148330": Directory not empty
WARNING: some useless files may be left behind in old database directory "base/148330"

2
build/slurm_reports/4_Exploit/job.29930.err Normal file
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@ -0,0 +1,2 @@
WARNING: could not remove file or directory "base/148498": Directory not empty
WARNING: some useless files may be left behind in old database directory "base/148498"

2
build/slurm_reports/4_Exploit/job.29931.err Normal file
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@ -0,0 +1,2 @@
mpirun: Forwarding signal 18 to job
slurmstepd: *** JOB 29931 ON compute07 CANCELLED AT 2022-01-10T13:42:28 ***

4
build/slurm_reports/4_Exploit/job.29932.err Normal file
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@ -0,0 +1,4 @@
WARNING: could not remove file or directory "base/149054": Directory not empty
WARNING: some useless files may be left behind in old database directory "base/149054"
mpirun: Forwarding signal 18 to job
slurmstepd: *** JOB 29932 ON compute08 CANCELLED AT 2022-01-10T13:42:33 ***

2
build/slurm_reports/4_Exploit/job.29933.err Normal file
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@ -0,0 +1,2 @@
mpirun: Forwarding signal 18 to job
slurmstepd: *** JOB 29933 ON compute04 CANCELLED AT 2022-01-28T22:29:25 ***

0
build/slurm_reports/4_Exploit/job.29934.err Normal file
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0
build/slurm_reports/4_Exploit/job.29935.err Normal file
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0
build/slurm_reports/4_Exploit/job.29936.err Normal file
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0
build/slurm_reports/4_Exploit/job.29937.err Normal file
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0
build/slurm_reports/4_Exploit/job.29938.err Normal file
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0
build/slurm_reports/4_Exploit/job.29939.err Normal file
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0
build/slurm_reports/4_Exploit/job.29940.err Normal file
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0
build/slurm_reports/4_Exploit/job.29941.err Normal file
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0
build/slurm_reports/4_Exploit/job.29942.err Normal file
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0
build/slurm_reports/4_Exploit/job.29943.err Normal file
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0
build/slurm_reports/4_Exploit/job.29944.err Normal file
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0
build/slurm_reports/4_Exploit/job.29945.err Normal file
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0
build/slurm_reports/4_Exploit/job.29946.err Normal file
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0
build/slurm_reports/4_Exploit/job.29947.err Normal file
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2
build/slurm_reports/4_Exploit/job.29948.err Normal file
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@ -0,0 +1,2 @@
WARNING: could not remove file or directory "base/151930": Directory not empty
WARNING: some useless files may be left behind in old database directory "base/151930"

2
build/slurm_reports/4_Exploit/job.29949.err Normal file
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@ -0,0 +1,2 @@
WARNING: could not remove file or directory "base/152099": Directory not empty
WARNING: some useless files may be left behind in old database directory "base/152099"

2
build/slurm_reports/4_Exploit/job.29950.err Normal file
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@ -0,0 +1,2 @@
WARNING: could not remove file or directory "base/152301": Directory not empty
WARNING: some useless files may be left behind in old database directory "base/152301"

2
build/slurm_reports/4_Exploit/job.29951.err Normal file
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@ -0,0 +1,2 @@
WARNING: could not remove file or directory "base/152470": Directory not empty
WARNING: some useless files may be left behind in old database directory "base/152470"

0
build/slurm_reports/4_Exploit/job.29952.err Normal file
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2
build/slurm_reports/4_Exploit/job.29953.err Normal file
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@ -0,0 +1,2 @@
WARNING: could not remove file or directory "base/152849": Directory not empty
WARNING: some useless files may be left behind in old database directory "base/152849"

2
build/slurm_reports/4_Exploit/job.29954.err Normal file
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@ -0,0 +1,2 @@
mpirun: Forwarding signal 18 to job
slurmstepd: *** JOB 29954 ON compute08 CANCELLED AT 2022-01-28T22:29:20 ***

4
build/slurm_reports/4_Exploit/job.29955.err Normal file
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@ -0,0 +1,4 @@
WARNING: could not remove file or directory "base/153302": Directory not empty
WARNING: some useless files may be left behind in old database directory "base/153302"
mpirun: Forwarding signal 18 to job
slurmstepd: *** JOB 29955 ON compute07 CANCELLED AT 2022-01-28T22:29:15 ***

10
build/slurm_reports/4_Exploit/omp/sync_data.csv Normal file
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@ -0,0 +1,10 @@
1,394,4417.392000
2,730,10775.825000
3,1584,32164.559000
4,2311,71212.538000
1,26682,932675.522000
2,46730,1761398.360000
3,183707,7201005.822000
4,238751,9630528.289000
1,1871618,123942944.247000
2,3489506,257746281.880000
1 1 394 4417.392000
2 2 730 10775.825000
3 3 1584 32164.559000
4 4 2311 71212.538000
5 1 26682 932675.522000
6 2 46730 1761398.360000
7 3 183707 7201005.822000
8 4 238751 9630528.289000
9 1 1871618 123942944.247000
10 2 3489506 257746281.880000

41
build/slurm_reports/4_Exploit/omp/sync_data.txt Normal file
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@ -0,0 +1,41 @@
----------------------------------- 2 cars -----------------------------------
Synchronous test with 1 services 4 omp threads 4 Qsize and 2 cars dispatched at 23:12 with jobid 29829
1 Services Synchronized: 394 states and 4417.392000 runtime
Synchronous test with 2 services 4 omp threads 4 Qsize and 2 cars dispatched at 23:13 with jobid 29830
2 Services Synchronized: 730 states and 10775.825000 runtime
Synchronous test with 3 services 4 omp threads 4 Qsize and 2 cars dispatched at 23:13 with jobid 29832
3 Services Synchronized: 1584 states and 32164.559000 runtime
Synchronous test with 4 services 4 omp threads 4 Qsize and 2 cars dispatched at 23:13 with jobid 29834
4 Services Synchronized: 2311 states and 71212.538000 runtime
----------------------------------- 3 cars -----------------------------------
Synchronous test with 1 services 4 omp threads 4 Qsize and 3 cars dispatched at 23:15 with jobid 29837
1 Services Synchronized: 26682 states and 932675.522000 runtime
Synchronous test with 2 services 4 omp threads 4 Qsize and 3 cars dispatched at 23:30 with jobid 29839
2 Services Synchronized: 46730 states and 1761398.360000 runtime
Synchronous test with 3 services 4 omp threads 4 Qsize and 3 cars dispatched at 00:00 with jobid 29841
3 Services Synchronized: 183707 states and 7201005.822000 runtime
Synchronous test with 4 services 4 omp threads 4 Qsize and 3 cars dispatched at 02:00 with jobid 29843
4 Services Synchronized: 238751 states and 9630528.289000 runtime
----------------------------------- 4 cars -----------------------------------
Synchronous test with 1 services 4 omp threads 4 Qsize and 4 cars dispatched at 04:41 with jobid 29845
1 Services Synchronized: 1871618 states and 123942944.247000 runtime
Synchronous test with 2 services 4 omp threads 4 Qsize and 4 cars dispatched at 15:07 with jobid 29870
2 Services Synchronized: 3489506 states and 257746281.880000 runtime
Synchronous test with 3 services 4 omp threads 4 Qsize and 4 cars dispatched at 14:43 with jobid 29893
Errors occurred. Please see err file for more details.
Synchronous test with 4 services 4 omp threads 4 Qsize and 4 cars dispatched at 22:33 with jobid 29912
Errors occurred. Please see err file for more details.
----------------------------------- 5 cars -----------------------------------
Synchronous test with 1 services 4 omp threads 4 Qsize and 5 cars dispatched at 14:59 with jobid 29933

14
build/slurm_reports/4_Exploit/ompnosync/sync_data.csv Normal file
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@ -0,0 +1,14 @@
1,394,11428.938000
2,730,26339.545000
3,1584,79134.852000
4,2311,124322.380000
1,26682,1520013.151000
3,183707,10121049.017000
1,2436,70129.371000
2,3036,94299.053000
3,4704,148472.962000
4,6050,205933.806000
1,102312,4279538.454000
2,139656,7662714.529000
3,263424,19137908.664000
2,9217296,836896967.841000
1 1 394 11428.938000
2 2 730 26339.545000
3 3 1584 79134.852000
4 4 2311 124322.380000
5 1 26682 1520013.151000
6 3 183707 10121049.017000
7 1 2436 70129.371000
8 2 3036 94299.053000
9 3 4704 148472.962000
10 4 6050 205933.806000
11 1 102312 4279538.454000
12 2 139656 7662714.529000
13 3 263424 19137908.664000
14 2 9217296 836896967.841000

62
build/slurm_reports/4_Exploit/ompnosync/sync_data.txt Normal file
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----------------------------------- 2 cars -----------------------------------
Non-Synchronous test with 1 services 4 threads 4 Qsize and 2 cars dispatched at 14:18 with jobid 29916
1 Services Non-Synchronized: 394 states and 11428.938000 runtime
Non-Synchronous test with 2 services 4 threads 4 Qsize and 2 cars dispatched at 14:19 with jobid 29918
2 Services Non-Synchronized: 730 states and 26339.545000 runtime
Non-Synchronous test with 3 services 4 threads 4 Qsize and 2 cars dispatched at 14:19 with jobid 29919
3 Services Non-Synchronized: 1584 states and 79134.852000 runtime
Non-Synchronous test with 4 services 4 threads 4 Qsize and 2 cars dispatched at 14:21 with jobid 29921
4 Services Non-Synchronized: 2311 states and 124322.380000 runtime
----------------------------------- 3 cars -----------------------------------
Non-Synchronous test with 1 services 4 threads 4 Qsize and 3 cars dispatched at 14:23 with jobid 29923
1 Services Non-Synchronized: 26682 states and 1520013.151000 runtime
Non-Synchronous test with 2 services 4 threads 4 Qsize and 3 cars dispatched at 14:49 with jobid 29925
Errors occurred. Please see err file for more details.
Non-Synchronous test with 3 services 4 threads 4 Qsize and 3 cars dispatched at 15:36 with jobid 29927
3 Services Non-Synchronized: 183707 states and 10121049.017000 runtime
Non-Synchronous test with 4 services 4 threads 4 Qsize and 3 cars dispatched at 18:25 with jobid 29930
Errors occurred. Please see err file for more details.
----------------------------------- 4 cars -----------------------------------
Non-Synchronous test with 1 services 4 threads 4 Qsize and 4 cars dispatched at 21:52 with jobid 29932
----------------------------------- 2 cars -----------------------------------
Non-Synchronous test with 1 services 4 threads 4 Qsize and 2 cars dispatched at 15:50 with jobid 29934
1 Services Non-Synchronized: 2436 states and 70129.371000 runtime
Non-Synchronous test with 2 services 4 threads 4 Qsize and 2 cars dispatched at 15:51 with jobid 29936
2 Services Non-Synchronized: 3036 states and 94299.053000 runtime
Non-Synchronous test with 3 services 4 threads 4 Qsize and 2 cars dispatched at 15:53 with jobid 29938
3 Services Non-Synchronized: 4704 states and 148472.962000 runtime
Non-Synchronous test with 4 services 4 threads 4 Qsize and 2 cars dispatched at 15:55 with jobid 29940
4 Services Non-Synchronized: 6050 states and 205933.806000 runtime
----------------------------------- 3 cars -----------------------------------
Non-Synchronous test with 1 services 4 threads 4 Qsize and 3 cars dispatched at 15:59 with jobid 29942
1 Services Non-Synchronized: 102312 states and 4279538.454000 runtime
Non-Synchronous test with 2 services 4 threads 4 Qsize and 3 cars dispatched at 17:10 with jobid 29944
2 Services Non-Synchronized: 139656 states and 7662714.529000 runtime
Non-Synchronous test with 3 services 4 threads 4 Qsize and 3 cars dispatched at 19:18 with jobid 29946
3 Services Non-Synchronized: 263424 states and 19137908.664000 runtime
Non-Synchronous test with 4 services 4 threads 4 Qsize and 3 cars dispatched at 00:37 with jobid 29948
Errors occurred. Please see err file for more details.
----------------------------------- 4 cars -----------------------------------
Non-Synchronous test with 1 services 4 threads 4 Qsize and 4 cars dispatched at 07:47 with jobid 29950
Errors occurred. Please see err file for more details.
Non-Synchronous test with 2 services 4 threads 4 Qsize and 4 cars dispatched at 00:20 with jobid 29952
2 Services Non-Synchronized: 9217296 states and 836896967.841000 runtime
Non-Synchronous test with 3 services 4 threads 4 Qsize and 4 cars dispatched at 16:48 with jobid 29954

9
build/slurm_reports/4_Exploit/serial/sync_data.csv Normal file
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@ -0,0 +1,9 @@
1,394,6625.154000
2,730,14864.590000
3,1584,48995.768000
4,2311,53336.317000
1,26682,927564.195000
2,46730,1759571.276000
3,183707,7206902.688000
4,238751,9638925.660000
1,1871618,123766808.613000
1 1 394 6625.154000
2 2 730 14864.590000
3 3 1584 48995.768000
4 4 2311 53336.317000
5 1 26682 927564.195000
6 2 46730 1759571.276000
7 3 183707 7206902.688000
8 4 238751 9638925.660000
9 1 1871618 123766808.613000

42
build/slurm_reports/4_Exploit/serial/sync_data.txt Normal file
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----------------------------------- 2 cars -----------------------------------
Synchronous test with 1 services 1 omp threads 1 Qsize and 2 cars dispatched at 23:13 with jobid 29831
1 Services Synchronized: 394 states and 6625.154000 runtime
Synchronous test with 2 services 1 omp threads 1 Qsize and 2 cars dispatched at 23:13 with jobid 29833
2 Services Synchronized: 730 states and 14864.590000 runtime
Synchronous test with 3 services 1 omp threads 1 Qsize and 2 cars dispatched at 23:14 with jobid 29835
3 Services Synchronized: 1584 states and 48995.768000 runtime
Synchronous test with 4 services 1 omp threads 1 Qsize and 2 cars dispatched at 23:15 with jobid 29836
4 Services Synchronized: 2311 states and 53336.317000 runtime
----------------------------------- 3 cars -----------------------------------
Synchronous test with 1 services 1 omp threads 1 Qsize and 3 cars dispatched at 23:16 with jobid 29838
1 Services Synchronized: 26682 states and 927564.195000 runtime
Synchronous test with 2 services 1 omp threads 1 Qsize and 3 cars dispatched at 23:31 with jobid 29840
2 Services Synchronized: 46730 states and 1759571.276000 runtime
Synchronous test with 3 services 1 omp threads 1 Qsize and 3 cars dispatched at 00:00 with jobid 29842
3 Services Synchronized: 183707 states and 7206902.688000 runtime
Synchronous test with 4 services 1 omp threads 1 Qsize and 3 cars dispatched at 02:01 with jobid 29844
4 Services Synchronized: 238751 states and 9638925.660000 runtime
----------------------------------- 4 cars -----------------------------------
Synchronous test with 1 services 1 omp threads 1 Qsize and 4 cars dispatched at 04:41 with jobid 29846
Job done, but slurm hung.
1 Services Synchronized: 1871618 states and 123766808.613000 runtime
Synchronous test with 2 services 1 omp threads 1 Qsize and 4 cars dispatched at 15:05 with jobid 29869
Errors occurred. Please see err file for more details.
Synchronous test with 3 services 1 omp threads 1 Qsize and 4 cars dispatched at 14:40 with jobid 29892
Errors occurred. Please see err file for more details.
Synchronous test with 4 services 1 omp threads 1 Qsize and 4 cars dispatched at 16:56 with jobid 29911
Errors occurred. Please see err file for more details.
----------------------------------- 5 cars -----------------------------------
Synchronous test with 1 services 1 omp threads 1 Qsize and 5 cars dispatched at 17:13 with jobid 29928

11
build/slurm_reports/4_Exploit/serialnosync/sync_data.csv Normal file
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@ -0,0 +1,11 @@
2,730,31515.185000
3,1584,81479.978000
4,2311,122948.097000
3,183707,10076802.103000
1,2436,72918.176000
2,3036,94880.743000
3,4704,145770.934000
4,6050,204454.082000
1,102312,4282833.629000
2,139656,7678905.072000
3,263424,19156201.784000
1 2 730 31515.185000
2 3 1584 81479.978000
3 4 2311 122948.097000
4 3 183707 10076802.103000
5 1 2436 72918.176000
6 2 3036 94880.743000
7 3 4704 145770.934000
8 4 6050 204454.082000
9 1 102312 4282833.629000
10 2 139656 7678905.072000
11 3 263424 19156201.784000

64
build/slurm_reports/4_Exploit/serialnosync/sync_data.txt Normal file
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----------------------------------- 2 cars -----------------------------------
Non-Synchronous test with 1 services 1 threads 1 Qsize and 2 cars dispatched at 14:16 with jobid 29913
----------------------------------- 2 cars -----------------------------------
Non-Synchronous test with 1 services 1 threads 1 Qsize and 2 cars dispatched at 14:18 with jobid 29914
Errors occurred. Please see err file for more details.
Non-Synchronous test with 2 services 1 threads 1 Qsize and 2 cars dispatched at 14:18 with jobid 29915
2 Services Non-Synchronized: 730 states and 31515.185000 runtime
Non-Synchronous test with 3 services 1 threads 1 Qsize and 2 cars dispatched at 14:19 with jobid 29917
3 Services Non-Synchronized: 1584 states and 81479.978000 runtime
Non-Synchronous test with 4 services 1 threads 1 Qsize and 2 cars dispatched at 14:20 with jobid 29920
4 Services Non-Synchronized: 2311 states and 122948.097000 runtime
----------------------------------- 3 cars -----------------------------------
Non-Synchronous test with 1 services 1 threads 1 Qsize and 3 cars dispatched at 14:22 with jobid 29922
Errors occurred. Please see err file for more details.
Non-Synchronous test with 2 services 1 threads 1 Qsize and 3 cars dispatched at 14:48 with jobid 29924
Errors occurred. Please see err file for more details.
Non-Synchronous test with 3 services 1 threads 1 Qsize and 3 cars dispatched at 15:35 with jobid 29926
3 Services Non-Synchronized: 183707 states and 10076802.103000 runtime
Non-Synchronous test with 4 services 1 threads 1 Qsize and 3 cars dispatched at 18:23 with jobid 29929
Errors occurred. Please see err file for more details.
----------------------------------- 4 cars -----------------------------------
Non-Synchronous test with 1 services 1 threads 1 Qsize and 4 cars dispatched at 21:51 with jobid 29931
----------------------------------- 2 cars -----------------------------------
Non-Synchronous test with 1 services 1 threads 1 Qsize and 2 cars dispatched at 15:51 with jobid 29935
1 Services Non-Synchronized: 2436 states and 72918.176000 runtime
Non-Synchronous test with 2 services 1 threads 1 Qsize and 2 cars dispatched at 15:52 with jobid 29937
2 Services Non-Synchronized: 3036 states and 94880.743000 runtime
Non-Synchronous test with 3 services 1 threads 1 Qsize and 2 cars dispatched at 15:54 with jobid 29939
3 Services Non-Synchronized: 4704 states and 145770.934000 runtime
Non-Synchronous test with 4 services 1 threads 1 Qsize and 2 cars dispatched at 15:56 with jobid 29941
4 Services Non-Synchronized: 6050 states and 204454.082000 runtime
----------------------------------- 3 cars -----------------------------------
Non-Synchronous test with 1 services 1 threads 1 Qsize and 3 cars dispatched at 16:00 with jobid 29943
1 Services Non-Synchronized: 102312 states and 4282833.629000 runtime
Non-Synchronous test with 2 services 1 threads 1 Qsize and 3 cars dispatched at 17:11 with jobid 29945
2 Services Non-Synchronized: 139656 states and 7678905.072000 runtime
Non-Synchronous test with 3 services 1 threads 1 Qsize and 3 cars dispatched at 19:19 with jobid 29947
3 Services Non-Synchronized: 263424 states and 19156201.784000 runtime
Non-Synchronous test with 4 services 1 threads 1 Qsize and 3 cars dispatched at 00:39 with jobid 29949
Errors occurred. Please see err file for more details.
----------------------------------- 4 cars -----------------------------------
Non-Synchronous test with 1 services 1 threads 1 Qsize and 4 cars dispatched at 07:48 with jobid 29951
Errors occurred. Please see err file for more details.
Non-Synchronous test with 2 services 1 threads 1 Qsize and 4 cars dispatched at 00:27 with jobid 29953
Errors occurred. Please see err file for more details.
Non-Synchronous test with 3 services 1 threads 1 Qsize and 4 cars dispatched at 17:21 with jobid 29955

215
build/sync_data_col.sh Executable file
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#!/usr/bin/env bash
#Choose folder
#folder=omp
#folder=mpi
#folder=serial
folder=serialnosync
#folder=ompnosync
DBNAME="$folder"
nodelist=compute04
pwd=`pwd`
#one=1
#4,8,16,32 thr
thrds=(4 8 16 32)
QSIZE=1
SKIPSYNC=false
if [[ "$folder" == serialnosync ]]; then
SKIPSYNC=true
fi
if [[ "$folder" == ompnosync ]]; then
SKIPSYNC=true
fi
if [[ "$SKIPSYNC" == false ]]; then
for thrd in "${thrds[@]}"
do
if [[ "$folder" == serial ]]; then
thrd=1
nodelist=compute05
fi
if [[ "$folder" == serialnosync ]]; then
thrd=1
nodelist=compute07
fi
if [[ "$folder" == ompnosync ]]; then
nodelist=compute08
fi
for qmult in {1..1}
do
if [[ "$qmult" -eq 3 ]]; then
QSIZE=$((thrd*4))
else
QSIZE=$((thrd*qmult))
fi
if [[ "$folder" == serial ]]; then
QSIZE=1
fi
#1..6 Cars
for cars in {2..6}
do
echo "----------------------------------- "$cars" cars -----------------------------------" >> ./slurm_reports/"$folder"/sync_data.txt
#1..4 (or 1..10)Services
for i in {1..4}
do
SKIP_FLAG=0
#Dispatch the job and get the output ("Submitted batch job <jobid>
JOB=`sbatch --nodelist="$nodelist" ag_run.sh "$i" "sync" "$cars" "$DBNAME" "$thrd" "$QSIZE"`
#Pull the jobid
JOB=`echo "$JOB" | grep -oP '(?<=job )[^ ]*'`
#Output will be stored as this format
FILE="./slurm_reports/job.${JOB}.out"
ERR="./slurm_reports/job.${JOB}.err"
NOW=`date +"%H:%M"`
echo "Synchronous test with "$i" services "$thrd" omp threads "$QSIZE" Qsize and "$cars" cars dispatched at "$NOW" with jobid "$JOB"" >> ./slurm_reports/"$folder"/sync_data.txt
#Wait until job is finished
while squeue | grep "$JOB" > /dev/null 2>&1; do
#Slurm is having an issue where the prog finishes but doesn't leave slurm queue
#Check if program finished by checking the output file, delay by 5 seconds for safety, then cancel the job
if test -f "$FILE" && (cat "$FILE" | grep "total run time" > /dev/null 2>&1) ; then
#if test -f "$FILE"; then
for j in {1..5}
do
sleep 1
done
SKIP_FLAG=1
echo "Job done, but slurm hung." >> ./slurm_reports/"$folder"/sync_data.txt
tmp=`scancel "$JOB"`
sleep 3
break
fi
#while ! test -f "$FILE"; do
sleep 1
#done
done
#Wait for the delay between job finish and file write
while ! test -f "$FILE"; do
sleep 1
done
#Get runtime and states from the output
RUNTIME=`cat "$FILE" | grep -oP '(?<=total run time is )[^ ]*'`
STATES=`cat "$FILE" | grep -oP '(?<=Total States: )[^ ]*'`
if ! test -s "$ERR" || test "$SKIP_FLAG" -eq 1 ; then
printf "${i} Services Synchronized: ${STATES} states and ${RUNTIME} runtime \n\n" >> ./slurm_reports/"$folder"/sync_data.txt
str="$i","$STATES","$RUNTIME"
echo $str >> ./slurm_reports/"$folder"/sync_data.csv
else
printf "Errors occurred. Please see err file for more details. \n\n" >> ./slurm_reports/"$folder"/sync_data.txt
fi
SKIP_FLAG=0
done
done
printf "\n\n" >> ./slurm_reports/"$folder"/sync_data.txt
done
done
fi
thrds=(4 8 16 32)
for thrd in "${thrds[@]}"
do
if [[ "$folder" == serial ]]; then
thrd=1
nodelist=compute05
fi
if [[ "$folder" == serialnosync ]]; then
thrd=1
nodelist=compute07
fi
if [[ "$folder" == ompnosync ]]; then
nodelist=compute08
fi
for qmult in {1..1}
do
if [[ "$qmult" -eq 3 ]]; then
QSIZE=$((thrd*4))
else
QSIZE=$((thrd*qmult))
fi
if [[ "$folder" == serial ]]; then
QSIZE=1
fi
for cars in {2..6}
do
echo "----------------------------------- "$cars" cars -----------------------------------" >> ./slurm_reports/"$folder"/sync_data.txt
#1..4, 1..10
for i in {1..4}
do
SKIP_FLAG=0
JOB=`sbatch --nodelist="$nodelist" ag_run.sh "$i" "non-sync" "$cars" "$folder" "$thrd" "$QSIZE"`
JOB=`echo "$JOB" | grep -oP '(?<=job )[^ ]*'`
FILE="./slurm_reports/job.${JOB}.out"
ERR="./slurm_reports/job.${JOB}.err"
NOW=`date +"%H:%M"`
echo "Non-Synchronous test with "$i" services "$thrd" threads "$QSIZE" Qsize and "$cars" cars dispatched at "$NOW" with jobid "$JOB"" >> ./slurm_reports/"$folder"/sync_data.txt
while squeue | grep "$JOB" > /dev/null 2>&1; do
#while ! test -f "$FILE"; do
if test -f "$FILE" && (cat "$FILE" | grep "total run time" > /dev/null 2>&1) ; then
#if test -f "$FILE"; then
for j in {1..5}
do
sleep 1
done
SKIP_FLAG=1
echo "Job done, but slurm hung." >> ./slurm_reports/"$folder"/sync_data.txt
tmp=`scancel "$JOB"`
break
fi
sleep 1
#done
done
while ! test -f "$FILE"; do
sleep 1
done
RUNTIME=`cat "$FILE" | grep -oP '(?<=total run time is )[^ ]*'`
STATES=`cat "$FILE" | grep -oP '(?<=Total States: )[^ ]*'`
if ! test -s "$ERR" || test "$SKIP_FLAG" -eq 1 ; then
printf "${i} Services Non-Synchronized: ${STATES} states and ${RUNTIME} runtime \n\n" >> ./slurm_reports/"$folder"/sync_data.txt
str="$i","$STATES","$RUNTIME"
echo $str >> ./slurm_reports/"$folder"/sync_data.csv
else
printf "Errors occurred. Please see err file for more details. \n\n" >> ./slurm_reports/"$folder"/sync_data.txt
fi
SKIP_FLAG=0
done
done
done
done