Submission

This commit is contained in:
Noah L. Schrick 2022-01-25 01:13:36 -06:00
parent 9a6b8e0a50
commit c8dabebd87
2 changed files with 94 additions and 87 deletions

View File

@ -23,7 +23,9 @@ g.deg <- degree(g)
# Plots
mainname <- paste("Network based on Degree for the", g.netname, "network", sep=" ")
sizemult <- 25/max(g.deg)
plot(g, vertex.size = g.deg*sizemult, main=mainname)
if(g.netname == "yeast"){
plot(g, vertex.size = g.deg*sizemult, main=mainname, vertex.label=NA)
} else{plot(g, vertex.size = g.deg*sizemult, main=mainname)}
g.hist <- hist(g.deg,-1:max(g.deg),plot=F)
plot(g.hist)
@ -36,7 +38,9 @@ t(t(g.eigs.sorted)) #print one element per line
sizemult <- 25/g.eigs.sorted[1]
V(g)$size <- (g.eigs*sizemult) #size the network nodes by eigenvector centrality
mainname <- paste("Network based on Eigenvector Centrality for the", g.netname, "network", sep=" ")
plot(g, main=mainname)
if(g.netname == "yeast"){
plot(g, main=mainname, vertex.label=NA)
} else{plot(g, main=mainname)}
@ -48,7 +52,9 @@ t(t(g.pr.sorted))
sizemult <- 25/g.pr.sorted[1]
V(g)$size <- (g.pr*sizemult) #size the network nodes by page rank
mainname <- paste("Network based on Page Rank for the", g.netname, "network", sep=" ")
plot(g, main=mainname)
if(g.netname == "yeast"){
plot(g, main=mainname, vertex.label=NA)
} else{plot(g, main=mainname)}
############### Katz ###############
katz.cent <- function(A, alpha=NULL, beta=NULL){ #NULL sets the default value
@ -82,6 +88,7 @@ kcs.df
sizemult <- 25/kcs.df[,1][1]
V(g)$size <- (kcs*sizemult) #size the network nodes by page rank
mainname <- paste("Network based on Katz Centrality for the", g.netname, "network", sep=" ")
plot(g, main=mainname)
if(g.netname == "yeast"){
plot(g, main=mainname, vertex.label=NA)
} else{plot(g, main=mainname)}

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