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ignore line: [LIBRARY_PATH=/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/:/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/../../../../lib/:/lib/../lib/:/usr/lib/../lib/:/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/../../../:/lib/:/usr/lib/] ignore line: [COLLECT_GCC_OPTIONS='-v' '-o' 'CMakeFiles/cmTC_a8511.dir/CMakeCXXCompilerABI.cpp.o' '-c' '-shared-libgcc' '-mtune=generic' '-march=x86-64' '-dumpdir' 'CMakeFiles/cmTC_a8511.dir/CMakeCXXCompilerABI.cpp.'] ignore line: [Linking CXX executable cmTC_a8511] ignore line: [/usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_a8511.dir/link.txt --verbose=1] ignore line: [/usr/bin/c++ -v CMakeFiles/cmTC_a8511.dir/CMakeCXXCompilerABI.cpp.o -o cmTC_a8511 ] ignore line: [Using built-in specs.] ignore line: [COLLECT_GCC=/usr/bin/c++] ignore line: [COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/lto-wrapper] ignore line: [Target: x86_64-pc-linux-gnu] ignore line: [Configured with: /build/gcc/src/gcc/configure --enable-languages=c c++ ada fortran go lto objc obj-c++ d --enable-bootstrap --prefix=/usr --libdir=/usr/lib --libexecdir=/usr/lib --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=https://bugs.archlinux.org/ --with-build-config=bootstrap-lto --with-linker-hash-style=gnu --with-system-zlib --enable-__cxa_atexit --enable-cet=auto --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-default-ssp --enable-gnu-indirect-function --enable-gnu-unique-object --enable-libstdcxx-backtrace --enable-link-serialization=1 --enable-linker-build-id --enable-lto --enable-multilib --enable-plugin --enable-shared --enable-threads=posix --disable-libssp --disable-libstdcxx-pch --disable-werror] ignore line: [Thread model: posix] ignore line: [Supported LTO compression algorithms: zlib zstd] ignore line: [gcc version 12.2.0 (GCC) ] ignore line: [COMPILER_PATH=/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/:/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/:/usr/lib/gcc/x86_64-pc-linux-gnu/:/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/:/usr/lib/gcc/x86_64-pc-linux-gnu/] ignore line: [LIBRARY_PATH=/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/:/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/../../../../lib/:/lib/../lib/:/usr/lib/../lib/:/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/../../../:/lib/:/usr/lib/] ignore line: [COLLECT_GCC_OPTIONS='-v' '-o' 'cmTC_a8511' '-shared-libgcc' '-mtune=generic' '-march=x86-64' '-dumpdir' 'cmTC_a8511.'] link line: [ /usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/collect2 -plugin /usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/liblto_plugin.so -plugin-opt=/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/lto-wrapper -plugin-opt=-fresolution=/tmp/ccJtrOp3.res -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lc -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc --build-id --eh-frame-hdr --hash-style=gnu -m elf_x86_64 -dynamic-linker /lib64/ld-linux-x86-64.so.2 -pie -o cmTC_a8511 /usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/../../../../lib/Scrt1.o /usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/../../../../lib/crti.o /usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/crtbeginS.o -L/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0 -L/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/../../../../lib -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/../../.. CMakeFiles/cmTC_a8511.dir/CMakeCXXCompilerABI.cpp.o -lstdc++ -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/crtendS.o /usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/../../../../lib/crtn.o] arg [/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/collect2] ==> ignore arg [-plugin] ==> ignore arg [/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/liblto_plugin.so] ==> ignore arg [-plugin-opt=/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/lto-wrapper] ==> ignore arg [-plugin-opt=-fresolution=/tmp/ccJtrOp3.res] ==> ignore arg [-plugin-opt=-pass-through=-lgcc_s] ==> ignore arg [-plugin-opt=-pass-through=-lgcc] ==> ignore arg [-plugin-opt=-pass-through=-lc] ==> ignore arg [-plugin-opt=-pass-through=-lgcc_s] ==> ignore arg [-plugin-opt=-pass-through=-lgcc] ==> ignore arg [--build-id] ==> ignore arg [--eh-frame-hdr] ==> ignore arg [--hash-style=gnu] ==> ignore arg [-m] ==> ignore arg [elf_x86_64] ==> ignore arg [-dynamic-linker] ==> ignore arg [/lib64/ld-linux-x86-64.so.2] ==> ignore arg [-pie] ==> ignore arg [-o] ==> ignore arg [cmTC_a8511] ==> ignore arg [/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/../../../../lib/Scrt1.o] ==> obj [/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/../../../../lib/Scrt1.o] arg [/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/../../../../lib/crti.o] ==> obj [/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/../../../../lib/crti.o] arg [/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/crtbeginS.o] ==> obj [/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/crtbeginS.o] arg [-L/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0] ==> dir [/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0] arg [-L/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/../../../../lib] ==> dir [/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/../../../../lib] arg [-L/lib/../lib] ==> dir [/lib/../lib] arg [-L/usr/lib/../lib] ==> dir [/usr/lib/../lib] arg [-L/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/../../..] ==> dir [/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/../../..] arg [CMakeFiles/cmTC_a8511.dir/CMakeCXXCompilerABI.cpp.o] ==> ignore arg [-lstdc++] ==> lib [stdc++] arg [-lm] ==> lib [m] arg [-lgcc_s] ==> lib [gcc_s] arg [-lgcc] ==> lib [gcc] arg [-lc] ==> lib [c] arg [-lgcc_s] ==> lib [gcc_s] arg [-lgcc] ==> lib [gcc] arg [/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/crtendS.o] ==> obj [/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/crtendS.o] arg [/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/../../../../lib/crtn.o] ==> obj [/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/../../../../lib/crtn.o] collapse obj [/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/../../../../lib/Scrt1.o] ==> [/usr/lib/Scrt1.o] collapse obj [/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/../../../../lib/crti.o] ==> [/usr/lib/crti.o] collapse obj [/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/../../../../lib/crtn.o] ==> [/usr/lib/crtn.o] collapse library dir [/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0] ==> [/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0] collapse library dir [/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/../../../../lib] ==> [/usr/lib] collapse library dir [/lib/../lib] ==> [/lib] collapse library dir [/usr/lib/../lib] ==> [/usr/lib] collapse library dir [/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/../../..] ==> [/usr/lib] implicit libs: [stdc++;m;gcc_s;gcc;c;gcc_s;gcc] implicit objs: [/usr/lib/Scrt1.o;/usr/lib/crti.o;/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/crtbeginS.o;/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0/crtendS.o;/usr/lib/crtn.o] implicit dirs: [/usr/lib/gcc/x86_64-pc-linux-gnu/12.2.0;/usr/lib;/lib] implicit fwks: [] Determining if the include file sys/types.h exists passed with the following output: Change Dir: /home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-ZsXxGK Run Build Command(s):/usr/bin/make -f Makefile cmTC_bdfe9/fast && /usr/bin/make -f CMakeFiles/cmTC_bdfe9.dir/build.make CMakeFiles/cmTC_bdfe9.dir/build make[1]: Entering directory '/home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-ZsXxGK' Building C object CMakeFiles/cmTC_bdfe9.dir/CheckIncludeFile.c.o /usr/bin/cc -Wall -Werror -O3 -DPALISADE_VERSION=1.11.8 -o CMakeFiles/cmTC_bdfe9.dir/CheckIncludeFile.c.o -c /home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-ZsXxGK/CheckIncludeFile.c Linking C executable cmTC_bdfe9 /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_bdfe9.dir/link.txt --verbose=1 /usr/bin/cc -Wall -Werror -O3 -DPALISADE_VERSION=1.11.8 CMakeFiles/cmTC_bdfe9.dir/CheckIncludeFile.c.o -o cmTC_bdfe9 make[1]: Leaving directory '/home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-ZsXxGK' Determining if the include file stdint.h exists passed with the following output: Change Dir: /home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-9zHLny Run Build Command(s):/usr/bin/make -f Makefile cmTC_9e55f/fast && /usr/bin/make -f CMakeFiles/cmTC_9e55f.dir/build.make CMakeFiles/cmTC_9e55f.dir/build make[1]: Entering directory '/home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-9zHLny' Building C object CMakeFiles/cmTC_9e55f.dir/CheckIncludeFile.c.o /usr/bin/cc -Wall -Werror -O3 -DPALISADE_VERSION=1.11.8 -o CMakeFiles/cmTC_9e55f.dir/CheckIncludeFile.c.o -c /home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-9zHLny/CheckIncludeFile.c Linking C executable cmTC_9e55f /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_9e55f.dir/link.txt --verbose=1 /usr/bin/cc -Wall -Werror -O3 -DPALISADE_VERSION=1.11.8 CMakeFiles/cmTC_9e55f.dir/CheckIncludeFile.c.o -o cmTC_9e55f make[1]: Leaving directory '/home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-9zHLny' Determining if the include file stddef.h exists passed with the following output: Change Dir: /home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-pHoA2h Run Build Command(s):/usr/bin/make -f Makefile cmTC_19b1c/fast && /usr/bin/make -f CMakeFiles/cmTC_19b1c.dir/build.make CMakeFiles/cmTC_19b1c.dir/build make[1]: Entering directory '/home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-pHoA2h' Building C object CMakeFiles/cmTC_19b1c.dir/CheckIncludeFile.c.o /usr/bin/cc -Wall -Werror -O3 -DPALISADE_VERSION=1.11.8 -o CMakeFiles/cmTC_19b1c.dir/CheckIncludeFile.c.o -c /home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-pHoA2h/CheckIncludeFile.c Linking C executable cmTC_19b1c /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_19b1c.dir/link.txt --verbose=1 /usr/bin/cc -Wall -Werror -O3 -DPALISADE_VERSION=1.11.8 CMakeFiles/cmTC_19b1c.dir/CheckIncludeFile.c.o -o cmTC_19b1c make[1]: Leaving directory '/home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-pHoA2h' Determining size of __int128 passed with the following output: Change Dir: /home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-kRrFIZ Run Build Command(s):/usr/bin/make -f Makefile cmTC_ff193/fast && /usr/bin/make -f CMakeFiles/cmTC_ff193.dir/build.make CMakeFiles/cmTC_ff193.dir/build make[1]: Entering directory '/home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-kRrFIZ' Building C object CMakeFiles/cmTC_ff193.dir/INT128.c.o /usr/bin/cc -Wall -Werror -O3 -DPALISADE_VERSION=1.11.8 -o CMakeFiles/cmTC_ff193.dir/INT128.c.o -c /home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-kRrFIZ/INT128.c Linking C executable cmTC_ff193 /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_ff193.dir/link.txt --verbose=1 /usr/bin/cc -Wall -Werror -O3 -DPALISADE_VERSION=1.11.8 CMakeFiles/cmTC_ff193.dir/INT128.c.o -o cmTC_ff193 make[1]: Leaving directory '/home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-kRrFIZ' Determining size of uint64_t passed with the following output: Change Dir: /home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-2WDY1v Run Build Command(s):/usr/bin/make -f Makefile cmTC_6af40/fast && /usr/bin/make -f CMakeFiles/cmTC_6af40.dir/build.make CMakeFiles/cmTC_6af40.dir/build make[1]: Entering directory '/home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-2WDY1v' Building C object CMakeFiles/cmTC_6af40.dir/INT64.c.o /usr/bin/cc -Wall -Werror -O3 -DPALISADE_VERSION=1.11.8 -o CMakeFiles/cmTC_6af40.dir/INT64.c.o -c /home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-2WDY1v/INT64.c Linking C executable cmTC_6af40 /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_6af40.dir/link.txt --verbose=1 /usr/bin/cc -Wall -Werror -O3 -DPALISADE_VERSION=1.11.8 CMakeFiles/cmTC_6af40.dir/INT64.c.o -o cmTC_6af40 make[1]: Leaving directory '/home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-2WDY1v' Detecting C OpenMP compiler ABI info compiled with the following output: Change Dir: /home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-y3xLy7 Run Build Command(s):/usr/bin/make -f Makefile cmTC_e7f6e/fast && /usr/bin/make -f CMakeFiles/cmTC_e7f6e.dir/build.make CMakeFiles/cmTC_e7f6e.dir/build make[1]: Entering directory '/home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-y3xLy7' Building C object CMakeFiles/cmTC_e7f6e.dir/OpenMPTryFlag.c.o /usr/bin/cc -Wall -Werror -O3 -DPALISADE_VERSION=1.11.8 -DMATHBACKEND=2 -fopenmp -v -o CMakeFiles/cmTC_e7f6e.dir/OpenMPTryFlag.c.o -c /home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-y3xLy7/OpenMPTryFlag.c Using built-in specs. 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} Performing C++ SOURCE FILE Test HAVE_CXX_FLAG_WALL succeeded with the following output: Change Dir: /home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-5tkJPS Run Build Command(s):/usr/bin/make -f Makefile cmTC_000cc/fast && /usr/bin/make -f CMakeFiles/cmTC_000cc.dir/build.make CMakeFiles/cmTC_000cc.dir/build make[1]: Entering directory '/home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-5tkJPS' Building CXX object CMakeFiles/cmTC_000cc.dir/src.cxx.o /usr/bin/c++ -DHAVE_CXX_FLAG_WALL -Wall -Werror -O3 -DPALISADE_VERSION=1.11.8 -Wno-parentheses -DMATHBACKEND=2 -fopenmp -std=c++11 -Wall -Wall -o CMakeFiles/cmTC_000cc.dir/src.cxx.o -c /home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-5tkJPS/src.cxx Linking CXX executable cmTC_000cc /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_000cc.dir/link.txt --verbose=1 /usr/bin/c++ -Wall -Werror -O3 -DPALISADE_VERSION=1.11.8 -Wno-parentheses -DMATHBACKEND=2 -fopenmp -std=c++11 -Wall CMakeFiles/cmTC_000cc.dir/src.cxx.o -o cmTC_000cc make[1]: Leaving directory '/home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-5tkJPS' Source file was: int main() { return 0; } Performing C++ SOURCE FILE Test HAVE_CXX_FLAG_WEXTRA succeeded with the following output: Change Dir: /home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-iIe3Od Run Build Command(s):/usr/bin/make -f Makefile cmTC_1932b/fast && /usr/bin/make -f CMakeFiles/cmTC_1932b.dir/build.make CMakeFiles/cmTC_1932b.dir/build make[1]: Entering directory '/home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-iIe3Od' Building CXX object CMakeFiles/cmTC_1932b.dir/src.cxx.o /usr/bin/c++ -DHAVE_CXX_FLAG_WEXTRA -Wall -Werror -O3 -DPALISADE_VERSION=1.11.8 -Wno-parentheses -DMATHBACKEND=2 -fopenmp -std=c++11 -Wall -Wextra -Wextra -o CMakeFiles/cmTC_1932b.dir/src.cxx.o -c /home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-iIe3Od/src.cxx Linking CXX executable cmTC_1932b /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_1932b.dir/link.txt --verbose=1 /usr/bin/c++ -Wall -Werror -O3 -DPALISADE_VERSION=1.11.8 -Wno-parentheses -DMATHBACKEND=2 -fopenmp -std=c++11 -Wall -Wextra CMakeFiles/cmTC_1932b.dir/src.cxx.o -o cmTC_1932b make[1]: Leaving directory '/home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-iIe3Od' Source file was: int main() { return 0; } Performing C++ SOURCE FILE Test HAVE_CXX_FLAG_WSHADOW succeeded with the following output: Change Dir: /home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-nHDEfO Run Build Command(s):/usr/bin/make -f Makefile cmTC_c2971/fast && /usr/bin/make -f CMakeFiles/cmTC_c2971.dir/build.make CMakeFiles/cmTC_c2971.dir/build make[1]: Entering directory '/home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-nHDEfO' Building CXX object CMakeFiles/cmTC_c2971.dir/src.cxx.o /usr/bin/c++ -DHAVE_CXX_FLAG_WSHADOW -Wall -Werror -O3 -DPALISADE_VERSION=1.11.8 -Wno-parentheses -DMATHBACKEND=2 -fopenmp -std=c++11 -Wall -Wextra -Wshadow -Wshadow -o CMakeFiles/cmTC_c2971.dir/src.cxx.o -c /home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-nHDEfO/src.cxx Linking CXX executable cmTC_c2971 /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_c2971.dir/link.txt --verbose=1 /usr/bin/c++ -Wall -Werror -O3 -DPALISADE_VERSION=1.11.8 -Wno-parentheses -DMATHBACKEND=2 -fopenmp -std=c++11 -Wall -Wextra -Wshadow CMakeFiles/cmTC_c2971.dir/src.cxx.o -o cmTC_c2971 make[1]: Leaving directory '/home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-nHDEfO' Source file was: int main() { return 0; } Performing C++ SOURCE FILE Test HAVE_CXX_FLAG_WERROR succeeded with the following output: Change Dir: /home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-fxsFub Run Build Command(s):/usr/bin/make -f Makefile cmTC_8ea05/fast && /usr/bin/make -f CMakeFiles/cmTC_8ea05.dir/build.make CMakeFiles/cmTC_8ea05.dir/build make[1]: Entering directory '/home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-fxsFub' Building CXX object CMakeFiles/cmTC_8ea05.dir/src.cxx.o /usr/bin/c++ -DHAVE_CXX_FLAG_WERROR -Wall -Werror -O3 -DPALISADE_VERSION=1.11.8 -Wno-parentheses -DMATHBACKEND=2 -fopenmp -std=c++11 -Wall -Wextra -Wshadow -Werror -Werror -o CMakeFiles/cmTC_8ea05.dir/src.cxx.o -c /home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-fxsFub/src.cxx Linking CXX executable cmTC_8ea05 /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_8ea05.dir/link.txt --verbose=1 /usr/bin/c++ -Wall -Werror -O3 -DPALISADE_VERSION=1.11.8 -Wno-parentheses -DMATHBACKEND=2 -fopenmp -std=c++11 -Wall -Wextra -Wshadow -Werror CMakeFiles/cmTC_8ea05.dir/src.cxx.o -o cmTC_8ea05 make[1]: Leaving directory '/home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-fxsFub' Source file was: int main() { return 0; } Performing C++ SOURCE FILE Test HAVE_CXX_FLAG_WSUGGEST_OVERRIDE succeeded with the following output: Change Dir: /home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-AnKzYH Run Build Command(s):/usr/bin/make -f Makefile cmTC_1c30a/fast && /usr/bin/make -f CMakeFiles/cmTC_1c30a.dir/build.make CMakeFiles/cmTC_1c30a.dir/build make[1]: Entering directory '/home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-AnKzYH' Building CXX object CMakeFiles/cmTC_1c30a.dir/src.cxx.o /usr/bin/c++ -DHAVE_CXX_FLAG_WSUGGEST_OVERRIDE -Wall -Werror -O3 -DPALISADE_VERSION=1.11.8 -Wno-parentheses -DMATHBACKEND=2 -fopenmp -std=c++11 -Wall -Wextra -Wshadow -Wsuggest-override -Wsuggest-override -o CMakeFiles/cmTC_1c30a.dir/src.cxx.o -c /home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-AnKzYH/src.cxx Linking CXX executable cmTC_1c30a /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_1c30a.dir/link.txt --verbose=1 /usr/bin/c++ -Wall -Werror -O3 -DPALISADE_VERSION=1.11.8 -Wno-parentheses -DMATHBACKEND=2 -fopenmp -std=c++11 -Wall -Wextra -Wshadow -Wsuggest-override CMakeFiles/cmTC_1c30a.dir/src.cxx.o -o cmTC_1c30a make[1]: Leaving directory '/home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-AnKzYH' Source file was: int main() { return 0; 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} Performing C++ SOURCE FILE Test HAVE_CXX_FLAG_WNO_DEPRECATED succeeded with the following output: Change Dir: /home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-XK4Rn6 Run Build Command(s):/usr/bin/make -f Makefile cmTC_e35b5/fast && /usr/bin/make -f CMakeFiles/cmTC_e35b5.dir/build.make CMakeFiles/cmTC_e35b5.dir/build make[1]: Entering directory '/home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-XK4Rn6' Building CXX object CMakeFiles/cmTC_e35b5.dir/src.cxx.o /usr/bin/c++ -DHAVE_CXX_FLAG_WNO_DEPRECATED -Wall -Werror -O3 -DPALISADE_VERSION=1.11.8 -Wno-parentheses -DMATHBACKEND=2 -fopenmp -std=c++11 -Wall -Wextra -Wshadow -Wsuggest-override -pedantic -pedantic-errors -fstrict-aliasing -Wno-deprecated-declarations -Wno-deprecated -Wno-deprecated -o CMakeFiles/cmTC_e35b5.dir/src.cxx.o -c /home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-XK4Rn6/src.cxx Linking CXX executable cmTC_e35b5 /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_e35b5.dir/link.txt --verbose=1 /usr/bin/c++ -Wall -Werror -O3 -DPALISADE_VERSION=1.11.8 -Wno-parentheses -DMATHBACKEND=2 -fopenmp -std=c++11 -Wall -Wextra -Wshadow -Wsuggest-override -pedantic -pedantic-errors -fstrict-aliasing -Wno-deprecated-declarations -Wno-deprecated CMakeFiles/cmTC_e35b5.dir/src.cxx.o -o cmTC_e35b5 make[1]: Leaving directory '/home/noah/Documents/School/CS-6643-Bioinformatics/CS-6643-Bioinformatics-Research-Project/Code/Duality_Technologies/PALISADE/build/CMakeFiles/CMakeScratch/TryCompile-XK4Rn6' Source file was: int main() { return 0; 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} int main(void) { pthread_t thread; pthread_create(&thread, NULL, test_func, NULL); pthread_detach(thread); pthread_cancel(thread); pthread_join(thread, NULL); pthread_atfork(NULL, NULL, NULL); pthread_exit(NULL); return 0; }