noah/CS-6643-Bioinformatics-Lab-4
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Noah L. Schrick 2022-09-30 12:52:46 -05:00
parent 0c85f75315
commit 8135395500
3 changed files with 9 additions and 2 deletions
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.~lock.Schrick-Noah_CS-6643_Lab-4.docx#
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@ -1 +1 @@
,noah,NovaArchSys,30.09.2022 12:27,file:///home/noah/.config/libreoffice/4; ,noah,NovaArchSys,30.09.2022 12:52,file:///home/noah/.config/libreoffice/4;

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Schrick-Noah_CS-6643_Lab-4.R
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@ -139,3 +139,10 @@ write.table(top_genes, sep="\t", file="", quote=F, row.names=F, col.names=F)
#### Optional 1: Identify Outliers #### Optional 1: Identify Outliers
mddCorr<-cor(GxS.covfilter) # distance based on correlation
d <- sqrt(1-mddCorr)
dim(d)
rownames(d)
mddTree = hclust(as.dist(d))
mddTree$labels <- phenos.df$X
plot(mddTree)

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Schrick-Noah_CS-6643_Lab-4.docx
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