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Serialization work

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This commit is contained in:
Noah L. Schrick 2021-12-04 21:51:15 -06:00
parent 9a15ef3c7a
commit e93a940e80
27 changed files with 708 additions and 1765931 deletions
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16
CMakeLists.txt
View File

@ -45,7 +45,9 @@ find_package(OpenMP)
find_package(BISON 2.4 REQUIRED) find_package(BISON 2.4 REQUIRED)
find_package(FLEX REQUIRED) find_package(FLEX REQUIRED)
find_package(Boost REQUIRED)
find_package(Boost REQUIRED serialization graph)
include_directories(${Boost_INCLUDE_DIR})
find_package(OpenSSL) find_package(OpenSSL)
find_package(Doxygen) find_package(Doxygen)
@ -75,6 +77,7 @@ include_directories("${CMAKE_SOURCE_DIR}/src/")
file(GLOB ag_gen_src "${CMAKE_SOURCE_DIR}/src/ag_gen/*.cpp") file(GLOB ag_gen_src "${CMAKE_SOURCE_DIR}/src/ag_gen/*.cpp")
file(GLOB utils_src "${CMAKE_SOURCE_DIR}/src/util/*.c" "${CMAKE_SOURCE_DIR}/src/util/*.cpp") file(GLOB utils_src "${CMAKE_SOURCE_DIR}/src/util/*.c" "${CMAKE_SOURCE_DIR}/src/util/*.cpp")
file(GLOB mpi_src "${CMAKE_SOURCE_DIR}/src/mpi/*.c" "${CMAKE_SOURCE_DIR}/src/mpi/*.cpp")
######################## ########################
### Network Model Parser ### Network Model Parser
@ -122,13 +125,19 @@ ADD_FLEX_BISON_DEPENDENCY(xp_scanner xp_parser)
add_executable(ag_gen "${CMAKE_SOURCE_DIR}/src/main.cpp" add_executable(ag_gen "${CMAKE_SOURCE_DIR}/src/main.cpp"
${FLEX_nm_scanner_OUTPUTS} ${BISON_nm_parser_OUTPUTS} ${FLEX_nm_scanner_OUTPUTS} ${BISON_nm_parser_OUTPUTS}
${FLEX_xp_scanner_OUTPUTS} ${BISON_xp_parser_OUTPUTS} ${FLEX_xp_scanner_OUTPUTS} ${BISON_xp_parser_OUTPUTS}
${ag_gen_src} ${utils_src}) ${ag_gen_src} ${utils_src} ${mpi_src})
target_link_libraries(ag_gen ${PostgreSQL_LIBRARIES}) target_link_libraries(ag_gen ${PostgreSQL_LIBRARIES} Boost::serialization)
add_executable(decode "${CMAKE_SOURCE_DIR}/src/tools/decode.cpp" add_executable(decode "${CMAKE_SOURCE_DIR}/src/tools/decode.cpp"
${ag_gen_src} ${utils_src}) ${ag_gen_src} ${utils_src})
target_link_libraries(decode ${PostgreSQL_LIBRARIES}) target_link_libraries(decode ${PostgreSQL_LIBRARIES})
#add_executable(serialize "${CMAKE_SOURCE_DIR}/src/tests/serialize.cpp"
# ${FLEX_nm_scanner_OUTPUTS} ${BISON_nm_parser_OUTPUTS}
# ${FLEX_xp_scanner_OUTPUTS} ${BISON_xp_parser_OUTPUTS}
# ${ag_gen_src} ${utils_src})
#target_link_libraries(serialize ${PostgreSQL_LIBRARIES} Boost::serialization)
if(CPPREDIS_FOUND) if(CPPREDIS_FOUND)
#include_directories("${CPPREDIS_INCLUDE_DIRS}") #include_directories("${CPPREDIS_INCLUDE_DIRS}")
link_directories("${CPPREDIS_LIBRARY_DIRS}") link_directories("${CPPREDIS_LIBRARY_DIRS}")
@ -137,6 +146,7 @@ if(CPPREDIS_FOUND)
target_link_libraries(ag_gen cpp_redis tacopie) target_link_libraries(ag_gen cpp_redis tacopie)
target_link_libraries(decode cpp_redis tacopie) target_link_libraries(decode cpp_redis tacopie)
#target_link_libraries(serialize cpp_redis tacopie)
endif() endif()
################ ################

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"command": "/usr/bin/cc -I/usr/include/postgresql -I\"/home/noah/Documents/School/Thesis Work/ag_parallel/src\" -g -o CMakeFiles/ag_gen.dir/src/util/str_array.c.o -c \"/home/noah/Documents/School/Thesis Work/ag_parallel/src/util/str_array.c\"", "command": "/usr/bin/cc -DBOOST_ALL_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -I/usr/include/postgresql -I\"/home/noah/Documents/School/Thesis Work/ag_parallel/src\" -g -o CMakeFiles/ag_gen.dir/src/util/str_array.c.o -c \"/home/noah/Documents/School/Thesis Work/ag_parallel/src/util/str_array.c\"",
"file": "/home/noah/Documents/School/Thesis Work/ag_parallel/src/util/str_array.c" "file": "/home/noah/Documents/School/Thesis Work/ag_parallel/src/util/str_array.c"
}, },
{ {
"directory": "/home/noah/Documents/School/Thesis Work/ag_parallel/build", "directory": "/home/noah/Documents/School/Thesis Work/ag_parallel/build",
"command": "/usr/bin/cc -I/usr/include/postgresql -I\"/home/noah/Documents/School/Thesis Work/ag_parallel/src\" -g -o CMakeFiles/ag_gen.dir/src/util/vector.c.o -c \"/home/noah/Documents/School/Thesis Work/ag_parallel/src/util/vector.c\"", "command": "/usr/bin/cc -DBOOST_ALL_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -I/usr/include/postgresql -I\"/home/noah/Documents/School/Thesis Work/ag_parallel/src\" -g -o CMakeFiles/ag_gen.dir/src/util/vector.c.o -c \"/home/noah/Documents/School/Thesis Work/ag_parallel/src/util/vector.c\"",
"file": "/home/noah/Documents/School/Thesis Work/ag_parallel/src/util/vector.c" "file": "/home/noah/Documents/School/Thesis Work/ag_parallel/src/util/vector.c"
},
{
"directory": "/home/noah/Documents/School/Thesis Work/ag_parallel/build",
"command": "/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -I/usr/include/postgresql -I\"/home/noah/Documents/School/Thesis Work/ag_parallel/src\" -std=c++14 -fopenmp -DREDIS -g -g -O0 -ggdb -Wall -fopenmp -pedantic -o CMakeFiles/ag_gen.dir/src/mpi/serialize.cpp.o -c \"/home/noah/Documents/School/Thesis Work/ag_parallel/src/mpi/serialize.cpp\"",
"file": "/home/noah/Documents/School/Thesis Work/ag_parallel/src/mpi/serialize.cpp"
},
{
"directory": "/home/noah/Documents/School/Thesis Work/ag_parallel/build",
"command": "/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -I/usr/include/postgresql -I\"/home/noah/Documents/School/Thesis Work/ag_parallel/src\" -std=c++14 -fopenmp -DREDIS -g -g -O0 -ggdb -Wall -fopenmp -pedantic -o CMakeFiles/ag_gen.dir/src/mpi/tasks.cpp.o -c \"/home/noah/Documents/School/Thesis Work/ag_parallel/src/mpi/tasks.cpp\"",
"file": "/home/noah/Documents/School/Thesis Work/ag_parallel/src/mpi/tasks.cpp"
} }
] ]

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1
build/qualfile.txt Normal file
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@ -0,0 +1 @@
22 serialization::archive 19 0 0 0 0 0 0 0 8 0 0 0 0 12 brake_months 1 = 1 6 17 0 14 exhaust_months 1 = 2 12 17 0 11 ac_odometer 1 = 6 120000 17 0 6 engine 1 = 3 gas 17 0 9 brake_vio 1 = 5 false 17 0 11 exhaust_vio 1 = 5 false 17 0 6 ac_vio 1 = 5 false 17 0 14 compliance_vio 1 = 5 false 17 0 0 1 0 0 0 0 0 4 road 0 0 2

2
build/run.sh
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@ -3,7 +3,7 @@ sudo -u postgres -i sh -c "createdb ag_gen ag_gen"
psql ag_gen < schema.sql psql ag_gen < schema.sql
#./ag_gen -n ../car_examples/generic_timeline_maintenance.nm -x ../car_examples/tmp.xp -g DOTFILE.dot -t 1 -q 1 #./ag_gen -n ../car_examples/generic_timeline_maintenance.nm -x ../car_examples/tmp.xp -g DOTFILE.dot -t 1 -q 1
#./ag_gen -n ../car_examples/generic_maintenance.nm -x ../car_examples/generic_maintenance.xp -g DOTFILE.dot -t 1 -q 1 #./ag_gen -n ../car_examples/generic_maintenance.nm -x ../car_examples/generic_maintenance.xp -g DOTFILE.dot -t 1 -q 1
./ag_gen -n ../fpga_examples/Network_5/car_network5.nm -x ../fpga_examples/Network_5/car_network5.xp -g DOTFILE.dot -t 1 -q 1 -p -a .20 ./ag_gen -n ../fpga_examples/Network_1/car_network1.nm -x ../fpga_examples/Network_1/car_network1.xp -g DOTFILE.dot -t 1 -q 1 -p -a .20
#./ag_gen -n ../car_examples/generic_timeline_maintenance.nm -x ../car_examples/sync_timeline_maintenance.xp -g DOTFILE.dot -t 1 -q 1 #./ag_gen -n ../car_examples/generic_timeline_maintenance.nm -x ../car_examples/sync_timeline_maintenance.xp -g DOTFILE.dot -t 1 -q 1
# python3 ../tools/color_code.py ../build/states.txt DOTFILE.dot new.dot # python3 ../tools/color_code.py ../build/states.txt DOTFILE.dot new.dot

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11
build/serialize.sh Executable file
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@ -0,0 +1,11 @@
sudo -u postgres -i sh -c "dropdb ag_gen" || true
sudo -u postgres -i sh -c "createdb ag_gen ag_gen"
psql ag_gen < schema.sql
#./ag_gen -n ../car_examples/generic_timeline_maintenance.nm -x ../car_examples/tmp.xp -g DOTFILE.dot -t 1 -q 1
#./ag_gen -n ../car_examples/generic_maintenance.nm -x ../car_examples/generic_maintenance.xp -g DOTFILE.dot -t 1 -q 1
./serialize -n ../fpga_examples/Network_5/car_network5.nm -x ../fpga_examples/Network_5/car_network5.xp -g DOTFILE.dot -t 1 -q 1 -p -a .20
#./ag_gen -n ../car_examples/generic_timeline_maintenance.nm -x ../car_examples/sync_timeline_maintenance.xp -g DOTFILE.dot -t 1 -q 1
# python3 ../tools/color_code.py ../build/states.txt DOTFILE.dot new.dot
#dot -Tsvg new.dot > ag.svg
dot -Tsvg DOTFILE.dot > ag.svg

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7
deps.sh
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@ -12,15 +12,16 @@ if [[ $OS = 'darwin' ]]; then
fi fi
elif [[ $OS = 'linux' ]]; then elif [[ $OS = 'linux' ]]; then
if hash pacman 2>/dev/null; then if hash pacman 2>/dev/null; then
sudo pacman -S cmake postgresql boost cppcheck clang doxygen graphviz libconfig sudo pacman -S cmake postgresql boost cppcheck clang doxygen graphviz libconfig openmpi
elif hash apt-get 2>/dev/null; then elif hash apt-get 2>/dev/null; then
sudo apt-get -y install libboost-graph-dev postgresql postgresql-contrib \ sudo apt-get -y install libboost-graph-dev postgresql postgresql-contrib \
libpq-dev cppcheck clang valgrind doxygen graphviz cmake \ libpq-dev cppcheck clang valgrind doxygen graphviz cmake \
build-essential bison flex libssl-dev libconfig++-dev libyaml-cpp-dev build-essential bison flex libssl-dev libconfig++-dev libyaml-cpp-dev \
openmpi
elif hash yum 2>/dev/null; then elif hash yum 2>/dev/null; then
sudo yum install cmake epel-release postgresql-devel boost-devel \ sudo yum install cmake epel-release postgresql-devel boost-devel \
openssl-devel graphviz-devel bison-devel flex-devel cppcheck valgrind \ openssl-devel graphviz-devel bison-devel flex-devel cppcheck valgrind \
tbb libconfig-devel tbb libconfig-devel openmpi
else else
echo "Your distro is currently not supported." echo "Your distro is currently not supported."
fi fi

1
src/ag_gen/ag_gen.cpp
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@ -16,6 +16,7 @@
#include "../util/odometer.h" #include "../util/odometer.h"
#include "../util/db_functions.h" #include "../util/db_functions.h"
#include "../util/avail_mem.h" #include "../util/avail_mem.h"
#include "../mpi/tasks.h"
#ifdef REDIS #ifdef REDIS

5
src/ag_gen/factbase.cpp
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@ -26,6 +26,11 @@ Factbase::Factbase(std::vector<Quality> q, std::vector<Topology> t)
id = 0; id = 0;
} }
Factbase::Factbase()
{
}
/** /**
* @brief Increments the current ID. * @brief Increments the current ID.
*/ */

29
src/ag_gen/factbase.h
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@ -5,6 +5,18 @@
#include <functional> #include <functional>
#include <vector> #include <vector>
#include <boost/archive/tmpdir.hpp>
#include <boost/archive/text_iarchive.hpp>
#include <boost/archive/text_oarchive.hpp>
#include <boost/serialization/base_object.hpp>
#include <boost/serialization/utility.hpp>
#include <boost/serialization/vector.hpp>
#include <boost/serialization/assume_abstract.hpp>
#include <boost/serialization/string.hpp>
#include <boost/serialization/is_bitwise_serializable.hpp>
#include "quality.h" #include "quality.h"
#include "topology.h" #include "topology.h"
@ -18,7 +30,13 @@ class NetworkState;
class Factbase { class Factbase {
static int current_id; static int current_id;
friend std::ostream & operator << (std::ostream &os, const Factbase &fb);
friend class boost::serialization::access;
int id; int id;
int qsize;
int tsize;
std::vector<Quality> qualities; std::vector<Quality> qualities;
std::vector<Topology> topologies; std::vector<Topology> topologies;
@ -26,8 +44,17 @@ class Factbase {
friend class NetworkState; friend class NetworkState;
template<class Archive>
void serialize(Archive &ar, const unsigned int /* file_version */){
ar & id;
ar & qualities;
ar & topologies;
}
public: public:
Factbase();
std::tuple<std::vector<Quality>, std::vector<Topology>> get_facts_tuple() const; std::tuple<std::vector<Quality>, std::vector<Topology>> get_facts_tuple() const;
bool find_quality(Quality &q) const; bool find_quality(Quality &q) const;
@ -50,4 +77,6 @@ class Factbase {
int get_size(); int get_size();
}; };
BOOST_SERIALIZATION_ASSUME_ABSTRACT(Factbase)
#endif #endif

5
src/ag_gen/network_state.cpp
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@ -27,6 +27,11 @@ NetworkState::NetworkState(std::vector<Quality> q, std::vector<Topology> t)
*/ */
NetworkState::NetworkState(const NetworkState &ns) = default; NetworkState::NetworkState(const NetworkState &ns) = default;
NetworkState::NetworkState()
{
//: Factbase()
}
/** /**
* @brief Sets the ID of the Factbase * @brief Sets the ID of the Factbase
*/ */

23
src/ag_gen/network_state.h
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@ -10,6 +10,18 @@
#include "quality.h" #include "quality.h"
#include "topology.h" #include "topology.h"
#include <boost/archive/tmpdir.hpp>
#include <boost/archive/text_iarchive.hpp>
#include <boost/archive/text_oarchive.hpp>
#include <boost/serialization/base_object.hpp>
#include <boost/serialization/utility.hpp>
#include <boost/serialization/list.hpp>
#include <boost/serialization/assume_abstract.hpp>
#include <boost/serialization/string.hpp>
#include <boost/serialization/is_bitwise_serializable.hpp>
#include "../util/keyvalue.h" #include "../util/keyvalue.h"
#include "../util/redis_manager.h" #include "../util/redis_manager.h"
@ -25,9 +37,18 @@ class NetworkState {
Factbase factbase; Factbase factbase;
friend class Factbase; friend class Factbase;
friend std::ostream & operator << (std::ostream &os, const NetworkState &nsb);
friend class boost::serialization::access;
template<class Archive>
void serialize(Archive &ar, const unsigned int version){
ar & factbase;
}
public: public:
NetworkState(std::vector<Quality> q, std::vector<Topology> t); NetworkState(std::vector<Quality> q, std::vector<Topology> t);
NetworkState(const NetworkState &ns); NetworkState(const NetworkState &ns);
NetworkState();
const Factbase &get_factbase() const; const Factbase &get_factbase() const;
size_t get_hash(Keyvalue &factlist) const; size_t get_hash(Keyvalue &factlist) const;
@ -51,4 +72,6 @@ class NetworkState {
void delete_topology(Topology &t); void delete_topology(Topology &t);
}; };
BOOST_SERIALIZATION_ASSUME_ABSTRACT(NetworkState)
#endif #endif

5
src/ag_gen/quality.cpp
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@ -24,6 +24,11 @@
Quality::Quality(int asset, std::string qualName, std::string o, std::string qualValue, Keyvalue &facts) Quality::Quality(int asset, std::string qualName, std::string o, std::string qualValue, Keyvalue &facts)
: asset_id(asset), name(std::move(qualName)), op(std::move(o)), value(std::move(qualValue)), encoded((size_t)facts.size()) {} : asset_id(asset), name(std::move(qualName)), op(std::move(o)), value(std::move(qualValue)), encoded((size_t)facts.size()) {}
Quality::Quality()
{
}
int Quality::get_asset_id() const { return asset_id; } int Quality::get_asset_id() const { return asset_id; }
/** /**

28
src/ag_gen/quality.h
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@ -7,8 +7,23 @@
#include <string> #include <string>
#include <boost/archive/tmpdir.hpp>
#include <boost/archive/text_iarchive.hpp>
#include <boost/archive/text_oarchive.hpp>
#include <boost/serialization/base_object.hpp>
#include <boost/serialization/utility.hpp>
#include <boost/serialization/list.hpp>
#include <boost/serialization/assume_abstract.hpp>
#include <boost/serialization/string.hpp>
#include <boost/serialization/is_bitwise_serializable.hpp>
#include "../util/keyvalue.h" #include "../util/keyvalue.h"
//EncodedQuality is a POD: can leverage bitwise serialization
union EncodedQuality { union EncodedQuality {
struct { struct {
int asset_id : 16; int asset_id : 16;
@ -19,6 +34,8 @@ union EncodedQuality {
size_t enc; size_t enc;
}; };
BOOST_IS_BITWISE_SERIALIZABLE(EncodedQuality)
/** /**
* @brief Holds information about a Quality and a parameter number. * @brief Holds information about a Quality and a parameter number.
*/ */
@ -44,6 +61,10 @@ using PostconditionQuality = std::tuple<ParameterizedQuality, std::string>;
* @brief Holds information for the Quality * @brief Holds information for the Quality
*/ */
class Quality { class Quality {
friend std::ostream & operator << (std::ostream &os, const Quality &ql);
friend class boost::serialization::access;
int asset_id; int asset_id;
std::string name; std::string name;
std::string op; std::string op;
@ -55,9 +76,15 @@ class Quality {
friend class Factbase; friend class Factbase;
template<class Archive>
void serialize(Archive &ar, const unsigned int /* file_version */){
ar & asset_id & name & op & value & encoded;
}
public: public:
Quality(int assetId, std::string qualName, std::string op, Quality(int assetId, std::string qualName, std::string op,
std::string qualValue, Keyvalue &facts); std::string qualValue, Keyvalue &facts);
Quality();
int get_asset_id() const; int get_asset_id() const;
std::string get_name() const; std::string get_name() const;
@ -77,6 +104,7 @@ class Quality {
bool operator>(const Quality &rhs) const; bool operator>(const Quality &rhs) const;
bool operator>=(const Quality &rhs) const; bool operator>=(const Quality &rhs) const;
bool operator<=(const Quality &rhs) const; bool operator<=(const Quality &rhs) const;
}; };
#endif // AG_GEN_QUALITY_H #endif // AG_GEN_QUALITY_H

5
src/ag_gen/topology.cpp
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@ -18,6 +18,11 @@ Topology::Topology(int f_asset, int t_asset, DIRECTION_T dir, std::string proper
: from_asset_id(f_asset), to_asset_id(t_asset), property(move(property)), : from_asset_id(f_asset), to_asset_id(t_asset), property(move(property)),
op(move(op)), value(move(val)), dir(std::move(dir)), encoded(encode(facts).enc) {} op(move(op)), value(move(val)), dir(std::move(dir)), encoded(encode(facts).enc) {}
Topology::Topology()
{
}
/** /**
* @return The From Asset ID * @return The From Asset ID
*/ */

24
src/ag_gen/topology.h
View File

@ -3,6 +3,17 @@
#include <string> #include <string>
#include <vector> #include <vector>
#include <boost/archive/tmpdir.hpp>
#include <boost/archive/text_iarchive.hpp>
#include <boost/archive/text_oarchive.hpp>
#include <boost/serialization/base_object.hpp>
#include <boost/serialization/utility.hpp>
#include <boost/serialization/list.hpp>
#include <boost/serialization/assume_abstract.hpp>
#include <boost/serialization/string.hpp>
#include <boost/serialization/is_bitwise_serializable.hpp>
#include "../util/keyvalue.h" #include "../util/keyvalue.h"
@ -25,6 +36,9 @@ union EncodedTopology {
size_t enc; size_t enc;
}; };
BOOST_IS_BITWISE_SERIALIZABLE(EncodedTopology)
struct ParameterizedTopology { struct ParameterizedTopology {
int from_param; int from_param;
int to_param; int to_param;
@ -56,6 +70,10 @@ using PostconditionTopology = std::tuple<ParameterizedTopology, std::string>;
* @brief Holds information for the Topology * @brief Holds information for the Topology
*/ */
class Topology { class Topology {
friend std::ostream & operator << (std::ostream &os, const Topology &tl);
friend class boost::serialization::access;
int from_asset_id; int from_asset_id;
int to_asset_id; int to_asset_id;
std::string property; std::string property;
@ -69,9 +87,15 @@ class Topology {
friend class Factbase; friend class Factbase;
template<class Archive>
void serialize(Archive &ar, const unsigned int /* file_version */){
ar & from_asset_id & to_asset_id & property & op & value & dir;
}
public: public:
Topology(int f_asset, int t_asset, DIRECTION_T dir, std::string property, Topology(int f_asset, int t_asset, DIRECTION_T dir, std::string property,
std::string op, std::string val, Keyvalue &facts); std::string op, std::string val, Keyvalue &facts);
Topology();
int get_from_asset_id() const; int get_from_asset_id() const;
int get_to_asset_id() const; int get_to_asset_id() const;

8
src/main.cpp
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@ -32,6 +32,7 @@
#include "util/hash.h" #include "util/hash.h"
#include "util/list.h" #include "util/list.h"
#include "util/mem.h" #include "util/mem.h"
#include "mpi/serialize.h"
#ifdef REDIS #ifdef REDIS
#include "util/redis_manager.h" #include "util/redis_manager.h"
@ -624,10 +625,17 @@ int main(int argc, char *argv[]) {
AGGenInstance postinstance; AGGenInstance postinstance;
//Serialization Unit Testing on Initial Data
//serialization_unit_testing(_instance);
std::cout << "Generating Attack Graph: " << std::flush; std::cout << "Generating Attack Graph: " << std::flush;
AGGen gen(_instance);//use AGGen class to instantiate an obj with the name gen! _instance obj as the parameter! constructor defined in ag_gen.cpp AGGen gen(_instance);//use AGGen class to instantiate an obj with the name gen! _instance obj as the parameter! constructor defined in ag_gen.cpp
postinstance = gen.generate(batch_process, batch_size, thread_count, init_qsize, alpha); //The method call to generate the attack graph, defined in ag_gen.cpp. postinstance = gen.generate(batch_process, batch_size, thread_count, init_qsize, alpha); //The method call to generate the attack graph, defined in ag_gen.cpp.
//Serialization Unit Testing on Postinstance Data
serialization_unit_testing(postinstance);
std::cout << "Done\n"; std::cout << "Done\n";
//std::cout << "# of edges " <<postinstance.edges.size()<<std::endl; //std::cout << "# of edges " <<postinstance.edges.size()<<std::endl;
//std::cout << "# of edge_asset_binding" <<postinstance.edges.size()<<std::endl; //std::cout << "# of edge_asset_binding" <<postinstance.edges.size()<<std::endl;

316
src/mpi/serialize.cpp Normal file
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@ -0,0 +1,316 @@
//! main.cpp contains the main fuction that runs the program including flag
//! handling and calls to functions that access the database and generate the
//! attack graph.
//!
#include <iostream>
#include <fstream>
#include <vector>
#include <string>
#include "../ag_gen/asset.h"
#include "../ag_gen/assetgroup.h"
#include "../ag_gen/edge.h"
#include "../ag_gen/exploit.h"
#include "../ag_gen/factbase.h"
#include "../ag_gen/network_state.h"
#include "../ag_gen/ag_gen.h"
#include <boost/graph/adjacency_list.hpp>
#include <boost/graph/properties.hpp>
#include <boost/graph/graphviz.hpp>
#include <boost/property_tree/ptree.hpp>
#include <boost/property_tree/ini_parser.hpp>
#include <boost/graph/visitors.hpp>
#include <boost/graph/depth_first_search.hpp>
#include <boost/archive/tmpdir.hpp>
#include <boost/archive/text_iarchive.hpp>
#include <boost/archive/text_oarchive.hpp>
#include <boost/serialization/base_object.hpp>
#include <boost/serialization/utility.hpp>
#include <boost/serialization/list.hpp>
#include <boost/serialization/assume_abstract.hpp>
#include <boost/serialization/string.hpp>
#include <boost/serialization/is_bitwise_serializable.hpp>
void save_quality(const Quality &q, const char * filename){
std::ofstream ofs(filename);
boost::archive::text_oarchive oa(ofs);
oa << q;
}
void restore_quality(Quality &q, const char * filename){
std::ifstream ifs(filename);
boost::archive::text_iarchive ia(ifs);
ia >> q;
}
int quality_check(Quality &q1, Quality &q2){
if (q1.get_asset_id() == q2.get_asset_id() &&
q1.get_name() == q2.get_name() &&
q1.get_op() == q2.get_op() &&
q1.get_value() == q2.get_value())
{
return 1;
}
else return 0;
}
void save_topology(const Topology &t, const char * filename){
std::ofstream ofs(filename);
boost::archive::text_oarchive oa(ofs);
oa << t;
}
void restore_topology(Topology &t, const char * filename){
std::ifstream ifs(filename);
boost::archive::text_iarchive ia(ifs);
ia >> t;
}
int topology_check(Topology &t1, Topology &t2){
if (t1.get_from_asset_id() == t2.get_from_asset_id() &&
t1.get_to_asset_id() == t2.get_to_asset_id() &&
t1.get_dir() == t2.get_dir() &&
t1.get_property() == t2.get_property() &&
t1.get_op() == t2.get_op() &&
t1.get_value() == t2.get_value())
{
return 1;
}
else return 0;
}
void save_factbase(const Factbase &fb, const char * filename){
std::ofstream ofs(filename);
boost::archive::text_oarchive oa(ofs);
oa << fb;
}
void restore_factbase(Factbase &fb, const char * filename){
std::ifstream ifs(filename);
boost::archive::text_iarchive ia(ifs);
ia >> fb;
}
int factbase_check(Factbase &fb1, Factbase &fb2){
int qual_count = 0;
int qual_corr = 0;
int topo_count = 0;
int topo_corr = 0;
auto fb1_tuple = fb1.get_facts_tuple();
auto fb1_quals = std::get<0>(fb1_tuple);
auto fb1_topos = std::get<1>(fb1_tuple);
auto fb2_tuple = fb2.get_facts_tuple();
auto fb2_quals = std::get<0>(fb2_tuple);
auto fb2_topos = std::get<1>(fb2_tuple);
auto itq1 = fb1_quals.begin();
auto itq2 = fb2_quals.begin();
auto itt1 = fb1_topos.begin();
auto itt2 = fb2_topos.begin();
while(itq1 != fb1_quals.end() || itq2 != fb2_quals.end())
{
qual_corr += quality_check(*itq1, *itq2);
qual_count++;
if(itq1 != fb1_quals.end())
++itq1;
if(itq2 != fb2_quals.end())
++itq2;
}
while(itt1 != fb1_topos.end() || itt2 != fb2_topos.end())
{
topo_corr += topology_check(*itt1, *itt2);
topo_count++;
if(itt1 != fb1_topos.end())
++itt1;
if(itt2 != fb2_topos.end())
++itt2;
}
if(fb1.get_id() == fb2.get_id() &&
qual_count == qual_corr &&
topo_count == topo_corr)
{
return 1;
}
else return 0;
}
void save_network_state(const NetworkState &ns, const char * filename){
std::ofstream ofs(filename);
boost::archive::text_oarchive oa(ofs);
oa << ns;
}
void restore_network_state(NetworkState &ns, const char * filename){
std::ifstream ifs(filename);
boost::archive::text_iarchive ia(ifs);
ia >> ns;
}
int network_state_check(NetworkState &ns1, NetworkState &ns2){
auto fb1 = ns1.get_factbase();
auto fb2 = ns2.get_factbase();
return factbase_check(fb1, fb2);
}
void serialization_unit_testing(AGGenInstance &instance){
printf("\n");
std::cout << "---------STARTING SERIALIZATION UNIT TESTING---------" << std::endl;
std::string filename(boost::archive::tmpdir());
filename += "/qualfile.txt";
auto init_quals = instance.initial_qualities;
auto init_topos = instance.initial_topologies;
NetworkState init_state(init_quals, init_topos);//instantiate an obj init_state with initial input
int e_flag = 0;
int qual_count = 0;
int qual_corr = 0;
int top_count = 0;
int top_corr = 0;
int fb_count = 0;
int fb_corr = 0;
int ns_count = 0;
int ns_corr = 0;
std::cout << "Performing Unit Testing on Quality Serialization." << std::endl;
for (auto qual : instance.initial_qualities)
{
//std::cout << "Orginial Quality:" << std::endl;
//qual.print();
//printf("\n");
save_quality(qual, filename.c_str());
Quality new_qual;
restore_quality(new_qual, filename.c_str());
//std::cout << "Quality after restoring from serialization:" << std::endl;
//new_qual.print();
//std::cout << "-------------------------------------------" << std::endl;
//printf("\n");
qual_count++;
qual_corr += quality_check(qual, new_qual);
}
std::cout << "Quality Unit Testing: " << std::to_string(qual_corr) << "/" << std::to_string(qual_count) << std::endl;
printf("\n");
std::cout << "Performing Unit Testing on Topology Serialization." << std::endl;
for (auto topo : instance.initial_topologies)
{
//std::cout << "Original Topology: " << std::endl;
//topo.print();
save_topology(topo, filename.c_str());
Topology new_top;
restore_topology(new_top, filename.c_str());
//std::cout << "Topology after restoring from serialization:" << std::endl;
//new_top.print();
//std::cout << "-------------------------------------------" << std::endl;
//printf("\n");
top_count++;
top_corr += topology_check(topo, new_top);
}
std::cout << "Topology Unit Testing: " << std::to_string(top_corr) << "/" << std::to_string(top_count) << std::endl;
printf("\n");
std::cout << "Performing Unit Testing on Factbase Serialization." << std::endl;
for (auto fb : instance.factbases)
{
save_factbase(fb, filename.c_str());
Factbase new_fb;
restore_factbase(new_fb, filename.c_str());
fb_count++;
fb_corr += factbase_check(fb, new_fb);
}
std::cout << "Factbase Unit Testing: " << std::to_string(fb_corr) << "/" << std::to_string(fb_count) << std::endl;
printf("\n");
std::cout << "Performing Unit Testing on Network State Serialization." << std::endl;
save_network_state(init_state, filename.c_str());
NetworkState new_ns;
restore_network_state(new_ns, filename.c_str());
ns_count++;
ns_corr += network_state_check(init_state, new_ns);
std::cout << "Network State Unit Testing: " << std::to_string(ns_corr) << "/" << std::to_string(ns_count) << std::endl;
printf("\n");
if(qual_corr == qual_count)
{
std::cout << "100% Success Rate for Quality Serialization." << std::endl;
}
else{
std::cout << "Errors occurred in the Quality Serialization." << std::endl;
e_flag = 1;
}
if(top_corr == top_count)
{
std::cout << "100% Success Rate for Topology Serialization." << std::endl;
}
else{
std::cout << "Errors occurred in the Topology Serialization." << std::endl;
e_flag = 1;
}
if(fb_corr == fb_count)
{
std::cout << "100% Success Rate for Factbase Serialization." << std::endl;
}
else{
std::cout << "Errors occurred in the Factbase Serialization." << std::endl;
e_flag = 1;
}
if(ns_corr == ns_count)
{
std::cout << "100% Success Rate for Network State Serialization." << std::endl;
}
else{
std::cout << "Errors occurred in the Network State Serialization." << std::endl;
e_flag = 1;
}
if(e_flag == 1)
std::cout << "-------------ERRORS OCCURRED DURING SERIALIZATION UNIT TESTING---------------" << std::endl;
std::cout << "---------FINISHED SERIALIZATION UNIT TESTING---------" << std::endl;
printf("\n");
return;
}

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src/mpi/serialize.h Normal file
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#ifndef SERIALIZE_H
#define SERIALIZE_H
void save_quality(const Quality &q, const char * filename);
void restore_quality(Quality &q, const char * filename);
int quality_check(Quality &q1, Quality &q2);
void save_topology(const Topology &t, const char * filename);
void restore_topology(Topology &t, const char * filename);
int topology_check(Topology &t1, Topology &t2);
void serialization_unit_testing(AGGenInstance &instance);
#endif //SERIALIZE_H

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src/mpi/tasks.cpp Normal file
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#include <boost/mpi.hpp>
#include <iostream>

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src/mpi/tasks.h Normal file
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