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Noah L. Schrick 2022-02-05 02:09:23 -06:00
parent 09269addca
commit 76d084d7dd
12 changed files with 3740 additions and 3138 deletions
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74
build/Makefile
View File

@ -48,19 +48,19 @@ cmake_force:
SHELL = /bin/sh SHELL = /bin/sh
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@ -68,7 +68,7 @@ CMAKE_BINARY_DIR = /home/nschrick/ag_parallel/build
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@ -761,7 +814,9 @@ help:
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@ -804,6 +859,9 @@ help:
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BIN
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1
build/build.sh
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@ -10,6 +10,5 @@ if [ "$(dnsdomainname)" = "hammer.esg.utulsa.edu" ]; then
module load postgresql module load postgresql
fi fi
make clean
cmake -DCMAKE_BUILD_TYPE=Debug ../ -DCMAKE_EXPORT_COMPILE_COMMANDS=ON -DMPICH_IGNORE_CXX_SEEK=1 cmake -DCMAKE_BUILD_TYPE=Debug ../ -DCMAKE_EXPORT_COMPILE_COMMANDS=ON -DMPICH_IGNORE_CXX_SEEK=1
make ag_gen make ag_gen

166
build/compile_commands.json
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@ -1,132 +1,142 @@
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"file": "/home/nschrick/ag_parallel/src/mpi/serialize.cpp" "file": "/home/noah/Documents/School/Thesis Work/ag_parallel/src/mpi/serialize.cpp"
}, },
{ {
"directory": "/home/nschrick/ag_parallel/build", "directory": "/home/noah/Documents/School/Thesis Work/ag_parallel/build",
"command": "/opt/apps/gcc/8.2.0/bin/g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -I/usr/include/postgresql -I/home/nschrick/ag_parallel/src -isystem /home/nschrick/pkg/boost/1.77.0/include -isystem /storage/home/nschrick/pkg/openmpi/4.1.2/include -isystem /home/nschrick/pkg/openmpi/4.1.2/include -std=c++14 -fopenmp -g -g -O0 -ggdb -Wall -fopenmp -pedantic -pthread -o CMakeFiles/ag_gen.dir/src/mpi/tasks.cpp.o -c /home/nschrick/ag_parallel/src/mpi/tasks.cpp", "command": "/usr/bin/c++ -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -I/usr/include/postgresql -I\"/home/noah/Documents/School/Thesis Work/ag_parallel/src\" -std=c++14 -fopenmp -DREDIS -g -g -O0 -ggdb -Wall -fopenmp -pedantic -pthread -o CMakeFiles/ag_gen.dir/src/mpi/tasks.cpp.o -c \"/home/noah/Documents/School/Thesis Work/ag_parallel/src/mpi/tasks.cpp\"",
"file": "/home/nschrick/ag_parallel/src/mpi/tasks.cpp" "file": "/home/noah/Documents/School/Thesis Work/ag_parallel/src/mpi/tasks.cpp"
},
{
"directory": "/home/noah/Documents/School/Thesis Work/ag_parallel/build",
"command": "/usr/bin/cc -I/usr/include/postgresql -I\"/home/noah/Documents/School/Thesis Work/ag_parallel/src\" -g -o CMakeFiles/dynstr_test.dir/src/util/mem.c.o -c \"/home/noah/Documents/School/Thesis Work/ag_parallel/src/util/mem.c\"",
"file": "/home/noah/Documents/School/Thesis Work/ag_parallel/src/util/mem.c"
},
{
"directory": "/home/noah/Documents/School/Thesis Work/ag_parallel/build",
"command": "/usr/bin/cc -I/usr/include/postgresql -I\"/home/noah/Documents/School/Thesis Work/ag_parallel/src\" -g -o CMakeFiles/dynstr_test.dir/src/tests/mem_test.c.o -c \"/home/noah/Documents/School/Thesis Work/ag_parallel/src/tests/mem_test.c\"",
"file": "/home/noah/Documents/School/Thesis Work/ag_parallel/src/tests/mem_test.c"
} }
] ]

1975
build/nm_parser.c
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112
build/nm_parser.tab.h
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@ -1,10 +1,9 @@
/* A Bison parser, made by GNU Bison 3.8.2. */
/* A Bison parser, made by GNU Bison 2.4.1. */ /* Bison interface for Yacc-like parsers in C
/* Skeleton interface for Bison's Yacc-like parsers in C Copyright (C) 1984, 1989-1990, 2000-2015, 2018-2021 Free Software Foundation,
Inc.
Copyright (C) 1984, 1989, 1990, 2000, 2001, 2002, 2003, 2004, 2005, 2006
Free Software Foundation, Inc.
This program is free software: you can redistribute it and/or modify This program is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by it under the terms of the GNU General Public License as published by
@ -17,7 +16,7 @@
GNU General Public License for more details. GNU General Public License for more details.
You should have received a copy of the GNU General Public License You should have received a copy of the GNU General Public License
along with this program. If not, see <http://www.gnu.org/licenses/>. */ along with this program. If not, see <https://www.gnu.org/licenses/>. */
/* As a special exception, you may create a larger work that contains /* As a special exception, you may create a larger work that contains
part or all of the Bison parser skeleton and distribute that work part or all of the Bison parser skeleton and distribute that work
@ -32,49 +31,63 @@
This special exception was added by the Free Software Foundation in This special exception was added by the Free Software Foundation in
version 2.2 of Bison. */ version 2.2 of Bison. */
/* DO NOT RELY ON FEATURES THAT ARE NOT DOCUMENTED in the manual,
especially those whose name start with YY_ or yy_. They are
private implementation details that can be changed or removed. */
/* Tokens. */ #ifndef YY_NM_HOME_NOAH_DOCUMENTS_SCHOOL_THESIS_WORK_AG_PARALLEL_BUILD_NM_PARSER_TAB_H_INCLUDED
#ifndef YYTOKENTYPE # define YY_NM_HOME_NOAH_DOCUMENTS_SCHOOL_THESIS_WORK_AG_PARALLEL_BUILD_NM_PARSER_TAB_H_INCLUDED
# define YYTOKENTYPE /* Debug traces. */
/* Put the tokens into the symbol table, so that GDB and other debuggers #ifndef YYDEBUG
know about them. */ # define YYDEBUG 0
enum yytokentype { #endif
IDENTIFIER = 258, #if YYDEBUG
INT = 259, extern int nmdebug;
FLOAT = 260,
EQ = 261,
GT = 262,
LT = 263,
GEQ = 264,
LEQ = 265,
ONEDIR = 266,
ONEDIRBACK = 267,
BIDIR = 268,
NOTONEDIR = 269,
NOTBIDIR = 270,
NETWORK = 271,
MODEL = 272,
ASSETS = 273,
COLON = 274,
FACTS = 275,
PERIOD = 276,
SEMI = 277,
QUALITY = 278,
COMMA = 279,
TOPOLOGY = 280,
WHITESPACE = 281,
TAGS = 282
};
#endif #endif
/* Token kinds. */
#ifndef YYTOKENTYPE
# define YYTOKENTYPE
enum yytokentype
{
YYEMPTY = -2,
YYEOF = 0, /* "end of file" */
YYerror = 256, /* error */
YYUNDEF = 257, /* "invalid token" */
IDENTIFIER = 258, /* IDENTIFIER */
INT = 259, /* INT */
FLOAT = 260, /* FLOAT */
EQ = 261, /* EQ */
GT = 262, /* GT */
LT = 263, /* LT */
GEQ = 264, /* GEQ */
LEQ = 265, /* LEQ */
ONEDIR = 266, /* ONEDIR */
ONEDIRBACK = 267, /* ONEDIRBACK */
BIDIR = 268, /* BIDIR */
NOTONEDIR = 269, /* NOTONEDIR */
NOTBIDIR = 270, /* NOTBIDIR */
NETWORK = 271, /* NETWORK */
MODEL = 272, /* MODEL */
ASSETS = 273, /* ASSETS */
COLON = 274, /* COLON */
FACTS = 275, /* FACTS */
PERIOD = 276, /* PERIOD */
SEMI = 277, /* SEMI */
QUALITY = 278, /* QUALITY */
COMMA = 279, /* COMMA */
TOPOLOGY = 280, /* TOPOLOGY */
WHITESPACE = 281, /* WHITESPACE */
TAGS = 282 /* TAGS */
};
typedef enum yytokentype yytoken_kind_t;
#endif
/* Value type. */
#if ! defined YYSTYPE && ! defined YYSTYPE_IS_DECLARED #if ! defined YYSTYPE && ! defined YYSTYPE_IS_DECLARED
typedef union YYSTYPE union YYSTYPE
{ {
#line 25 "/home/noah/Documents/School/Thesis Work/ag_parallel/src/parser/nm-parser/nm_parser.yy"
/* Line 1676 of yacc.c */
#line 25 "/home/nschrick/ag_parallel/src/parser/nm-parser/nm_parser.yy"
struct str_array* arr; struct str_array* arr;
struct list* lst; struct list* lst;
@ -83,16 +96,19 @@ typedef union YYSTYPE
struct fact *fct; struct fact *fct;
char* string; char* string;
#line 100 "/home/noah/Documents/School/Thesis Work/ag_parallel/build/nm_parser.tab.h"
};
/* Line 1676 of yacc.c */ typedef union YYSTYPE YYSTYPE;
#line 90 "/home/nschrick/ag_parallel/build/nm_parser.tab.h"
} YYSTYPE;
# define YYSTYPE_IS_TRIVIAL 1 # define YYSTYPE_IS_TRIVIAL 1
# define yystype YYSTYPE /* obsolescent; will be withdrawn */
# define YYSTYPE_IS_DECLARED 1 # define YYSTYPE_IS_DECLARED 1
#endif #endif
extern YYSTYPE nmlval; extern YYSTYPE nmlval;
int nmparse (struct networkmodel* nm);
#endif /* !YY_NM_HOME_NOAH_DOCUMENTS_SCHOOL_THESIS_WORK_AG_PARALLEL_BUILD_NM_PARSER_TAB_H_INCLUDED */

1025
build/nm_scanner.c
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6
build/run.sh
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@ -55,8 +55,12 @@ if [ "$TYPE" == "$strval1" ]; then
#Old #Old
#./ag_gen -n ../Feb_2021/generic_timeline_maintenance.nm -x ../Feb_2021/Sync/"$NUM_SERV"_Serv/sync_timeline_maintenance.xp -g DOTFILE.dot -t 1 -q 1 -p -a 0.9 #./ag_gen -n ../Feb_2021/generic_timeline_maintenance.nm -x ../Feb_2021/Sync/"$NUM_SERV"_Serv/sync_timeline_maintenance.xp -g DOTFILE.dot -t 1 -q 1 -p -a 0.9
mpiexec --mca btl_openib_allow_ib 1 --mca btl openib,self,vader --mca opal_warn_on_missing_libcuda 0 --bind-to numa --map-by numa -np "$NODES" --timeout 129600 ./ag_gen -n ../Oct_2021/nm_files/"$CARS"_car_timeline_maintenance.nm -x ../Oct_2021/Sync/10_Exploits/"$NUM_SERV"_Serv/sync_timeline_maintenance.xp -t "$NUM_THREADS" -q 1 -p -a 0.6 -z "$DBNAME"
if [ "$(dnsdomainname)" = "hammer.esg.utulsa.edu" ]; then
mpiexec --mca btl_openib_allow_ib 1 --mca btl openib,self,vader --mca opal_warn_on_missing_libcuda 0 --bind-to numa --map-by numa -np "$NODES" --timeout 129600 ./ag_gen -n ../Oct_2021/nm_files/"$CARS"_car_timeline_maintenance.nm -x ../Oct_2021/Sync/10_Exploits/"$NUM_SERV"_Serv/sync_timeline_maintenance.xp -t "$NUM_THREADS" -q 1 -p -a 0.6 -z "$DBNAME"
else
mpiexec --mca btl_openib_allow_ib 1 --mca opal_warn_on_missing_libcuda 0 --bind-to numa --map-by numa -np "$NODES" --timeout 129600 ./ag_gen -n ../Oct_2021/nm_files/"$CARS"_car_timeline_maintenance.nm -x ../Oct_2021/Sync/4_Exploits/"$NUM_SERV"_Serv/sync_timeline_maintenance.xp -t "$NUM_THREADS" -q 1 -p -a 0.6 -z "$DBNAME"
fi
# 4 Exploit # 4 Exploit
#mpiexec -np "$NODES" --bind-to numa --map-by numa ./ag_gen -n ../Oct_2021/nm_files/"$CARS"_car_timeline_maintenance.nm -x ../Oct_2021/Sync/4_Exploits/"$NUM_SERV"_Serv/sync_timeline_maintenance.xp -t 1 -q 1 -p -a 0.6 -z "$DBNAME" #mpiexec -np "$NODES" --bind-to numa --map-by numa ./ag_gen -n ../Oct_2021/nm_files/"$CARS"_car_timeline_maintenance.nm -x ../Oct_2021/Sync/4_Exploits/"$NUM_SERV"_Serv/sync_timeline_maintenance.xp -t 1 -q 1 -p -a 0.6 -z "$DBNAME"

2175
build/xp_parser.c
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132
build/xp_parser.tab.h
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@ -1,10 +1,9 @@
/* A Bison parser, made by GNU Bison 3.8.2. */
/* A Bison parser, made by GNU Bison 2.4.1. */ /* Bison interface for Yacc-like parsers in C
/* Skeleton interface for Bison's Yacc-like parsers in C Copyright (C) 1984, 1989-1990, 2000-2015, 2018-2021 Free Software Foundation,
Inc.
Copyright (C) 1984, 1989, 1990, 2000, 2001, 2002, 2003, 2004, 2005, 2006
Free Software Foundation, Inc.
This program is free software: you can redistribute it and/or modify This program is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by it under the terms of the GNU General Public License as published by
@ -17,7 +16,7 @@
GNU General Public License for more details. GNU General Public License for more details.
You should have received a copy of the GNU General Public License You should have received a copy of the GNU General Public License
along with this program. If not, see <http://www.gnu.org/licenses/>. */ along with this program. If not, see <https://www.gnu.org/licenses/>. */
/* As a special exception, you may create a larger work that contains /* As a special exception, you may create a larger work that contains
part or all of the Bison parser skeleton and distribute that work part or all of the Bison parser skeleton and distribute that work
@ -32,59 +31,73 @@
This special exception was added by the Free Software Foundation in This special exception was added by the Free Software Foundation in
version 2.2 of Bison. */ version 2.2 of Bison. */
/* DO NOT RELY ON FEATURES THAT ARE NOT DOCUMENTED in the manual,
especially those whose name start with YY_ or yy_. They are
private implementation details that can be changed or removed. */
/* Tokens. */ #ifndef YY_XP_HOME_NOAH_DOCUMENTS_SCHOOL_THESIS_WORK_AG_PARALLEL_BUILD_XP_PARSER_TAB_H_INCLUDED
#ifndef YYTOKENTYPE # define YY_XP_HOME_NOAH_DOCUMENTS_SCHOOL_THESIS_WORK_AG_PARALLEL_BUILD_XP_PARSER_TAB_H_INCLUDED
# define YYTOKENTYPE /* Debug traces. */
/* Put the tokens into the symbol table, so that GDB and other debuggers #ifndef YYDEBUG
know about them. */ # define YYDEBUG 0
enum yytokentype { #endif
IDENTIFIER = 258, #if YYDEBUG
INT = 259, extern int xpdebug;
FLOAT = 260,
GROUP = 261,
EQ = 262,
NEQ = 263,
GT = 264,
LT = 265,
GEQ = 266,
LEQ = 267,
PLUSEQ = 268,
SUBEQ = 269,
ONEDIR = 270,
ONEDIRBACK = 271,
BIDIR = 272,
NOTONEDIR = 273,
NOTBIDIR = 274,
ADD = 275,
INSERT = 276,
UPDATE = 277,
DELETE = 278,
REMOVE = 279,
EXPLOIT = 280,
PRECONDITIONS = 281,
POSTCONDITIONS = 282,
COLON = 283,
FACTS = 284,
PERIOD = 285,
SEMI = 286,
QUALITY = 287,
COMMA = 288,
TOPOLOGY = 289,
WHITESPACE = 290,
LPAREN = 291,
RPAREN = 292
};
#endif #endif
/* Token kinds. */
#ifndef YYTOKENTYPE
# define YYTOKENTYPE
enum yytokentype
{
YYEMPTY = -2,
YYEOF = 0, /* "end of file" */
YYerror = 256, /* error */
YYUNDEF = 257, /* "invalid token" */
IDENTIFIER = 258, /* IDENTIFIER */
INT = 259, /* INT */
FLOAT = 260, /* FLOAT */
GROUP = 261, /* GROUP */
EQ = 262, /* EQ */
NEQ = 263, /* NEQ */
GT = 264, /* GT */
LT = 265, /* LT */
GEQ = 266, /* GEQ */
LEQ = 267, /* LEQ */
PLUSEQ = 268, /* PLUSEQ */
SUBEQ = 269, /* SUBEQ */
ONEDIR = 270, /* ONEDIR */
ONEDIRBACK = 271, /* ONEDIRBACK */
BIDIR = 272, /* BIDIR */
NOTONEDIR = 273, /* NOTONEDIR */
NOTBIDIR = 274, /* NOTBIDIR */
ADD = 275, /* ADD */
INSERT = 276, /* INSERT */
UPDATE = 277, /* UPDATE */
DELETE = 278, /* DELETE */
REMOVE = 279, /* REMOVE */
EXPLOIT = 280, /* EXPLOIT */
PRECONDITIONS = 281, /* PRECONDITIONS */
POSTCONDITIONS = 282, /* POSTCONDITIONS */
COLON = 283, /* COLON */
FACTS = 284, /* FACTS */
PERIOD = 285, /* PERIOD */
SEMI = 286, /* SEMI */
QUALITY = 287, /* QUALITY */
COMMA = 288, /* COMMA */
TOPOLOGY = 289, /* TOPOLOGY */
WHITESPACE = 290, /* WHITESPACE */
LPAREN = 291, /* LPAREN */
RPAREN = 292 /* RPAREN */
};
typedef enum yytokentype yytoken_kind_t;
#endif
/* Value type. */
#if ! defined YYSTYPE && ! defined YYSTYPE_IS_DECLARED #if ! defined YYSTYPE && ! defined YYSTYPE_IS_DECLARED
typedef union YYSTYPE union YYSTYPE
{ {
#line 21 "/home/noah/Documents/School/Thesis Work/ag_parallel/src/parser/xp-parser/xp_parser.yy"
/* Line 1676 of yacc.c */
#line 21 "/home/nschrick/ag_parallel/src/parser/xp-parser/xp_parser.yy"
struct str_array *arr; struct str_array *arr;
struct list *list; struct list *list;
@ -94,16 +107,19 @@ typedef union YYSTYPE
struct fact *fct; struct fact *fct;
char *string; char *string;
#line 111 "/home/noah/Documents/School/Thesis Work/ag_parallel/build/xp_parser.tab.h"
};
/* Line 1676 of yacc.c */ typedef union YYSTYPE YYSTYPE;
#line 101 "/home/nschrick/ag_parallel/build/xp_parser.tab.h"
} YYSTYPE;
# define YYSTYPE_IS_TRIVIAL 1 # define YYSTYPE_IS_TRIVIAL 1
# define yystype YYSTYPE /* obsolescent; will be withdrawn */
# define YYSTYPE_IS_DECLARED 1 # define YYSTYPE_IS_DECLARED 1
#endif #endif
extern YYSTYPE xplval; extern YYSTYPE xplval;
int xpparse (struct list *xplist);
#endif /* !YY_XP_HOME_NOAH_DOCUMENTS_SCHOOL_THESIS_WORK_AG_PARALLEL_BUILD_XP_PARSER_TAB_H_INCLUDED */

1088
build/xp_scanner.c
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60
src/ag_gen/ag_gen.cpp
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@ -359,6 +359,7 @@ AGGenInstance &AGGen::generate(bool batch_process, int batch_size, int numThrd,
int mpi_exit = 0; int mpi_exit = 0;
double f_alpha = 0.0; double f_alpha = 0.0;
int zero_queue = 0;
auto tot_sys_mem = getTotalSystemMemory(); auto tot_sys_mem = getTotalSystemMemory();
std::deque<NetworkState> localFrontier; std::deque<NetworkState> localFrontier;
localFrontier.emplace_front(frontier[k]); localFrontier.emplace_front(frontier[k]);
@ -397,20 +398,15 @@ AGGenInstance &AGGen::generate(bool batch_process, int batch_size, int numThrd,
ttwo_comm = world.split(world.rank() >= send_check(world, alloc) && world.rank() <= (alloc+two_alloc)); ttwo_comm = world.split(world.rank() >= send_check(world, alloc) && world.rank() <= (alloc+two_alloc));
//std::cout << "TCOMM SIZE: " << tcomm.size() << std::endl; //std::cout << "TCOMM SIZE: " << tcomm.size() << std::endl;
//std::cout << "TTWO_COMM SIZE: " << ttwo_comm.size() << std::endl; //std::cout << "TTWO_COMM SIZE: " << ttwo_comm.size() << std::endl;
while (!localFrontier.empty() || !unex_empty() || world.rank() > 0){//while starts while (!localFrontier.empty() || !unex_empty() || world.iprobe(mpi::any_source, 5) || world.rank() > 0 || (world.rank() ==0 && zero_queue > 0)){//while starts
//Node 0 needs to tell other nodes to continue if (world.rank() != 0) {
if(world.rank() == 0){
int dummy = 1;
for (int w = 1; w < world.size(); w++){
mpi::request dum_req = world.isend(w, 14, dummy);
dum_req.wait();
}
}
else {
//If we don't have the go-ahead, check for the Finalize message. //If we don't have the go-ahead, check for the Finalize message.
//std::cout << "Node " << world.rank() << " is waiting for the go-ahead or finalize message." << std::endl; //std::cout << "Node " << world.rank() << " is waiting for the go-ahead or finalize message." << std::endl;
if(!world.iprobe(0, 14)){
//Let Node 0 we're waiting
world.isend(0, 12, 1);
}
while(!world.iprobe(0, 14)){ while(!world.iprobe(0, 14)){
if(world.iprobe(0, 15)){ if(world.iprobe(0, 15)){
mpi_exit = 1; mpi_exit = 1;
@ -427,11 +423,11 @@ AGGenInstance &AGGen::generate(bool batch_process, int batch_size, int numThrd,
//We need to refill the localFrontier with states from the database if it's empty //We need to refill the localFrontier with states from the database if it's empty
//TODO: Investigate if it's faster to read from DB directly into Node 0 //TODO: Investigate if it's faster to read from DB directly into Node 0
//Or if faster to have worker node read from DB, then comm to Node 0 //Or if faster to have worker node read from DB, then comm to Node 0
if(localFrontier.empty() && world.rank() == 0) { if(localFrontier.empty() && world.rank() == 0 && !world.iprobe(mpi::any_source, 5) && zero_queue == 0) {
struct timeval t01,t02; struct timeval t01,t02;
gettimeofday(&t01,NULL); gettimeofday(&t01,NULL);
task_zero(instance, localFrontier, mem_threshold); task_zero(instance, localFrontier, mem_threshold);
std::cout << "Finished task 0." << std::endl; //std::cout << "Finished task 0." << std::endl;
gettimeofday(&t02,NULL); gettimeofday(&t02,NULL);
total_task0+=(t02.tv_sec-t01.tv_sec)*1000.0+(t02.tv_usec-t01.tv_usec)/1000.0; total_task0+=(t02.tv_sec-t01.tv_sec)*1000.0+(t02.tv_usec-t01.tv_usec)/1000.0;
} }
@ -439,12 +435,23 @@ AGGenInstance &AGGen::generate(bool batch_process, int batch_size, int numThrd,
//Task 0 to Task 1 Communication //Task 0 to Task 1 Communication
if(world.rank() == 0) if(world.rank() == 0)
{ {
auto current_state = localFrontier.back(); //Send at most 50 states at one time to Task 1, assuming we don't have more state data to add
localFrontier.pop_back(); //if (!world.iprobe(mpi::any_source, 5)){
for(int l=0; l < alloc; l++){ for (int f = 0; f < std::min(50, (int)localFrontier.size()); f++){
mpi::request cs_req = world.isend(send_check(world, l), 20, current_state); auto current_state = localFrontier.back();
cs_req.wait(); localFrontier.pop_back();
} for(int l=0; l < alloc; l++){
mpi::request cs_req = world.isend(send_check(world, l), 20, current_state);
cs_req.wait();
}
//Node 0 needs to tell other nodes to continue the same number of times
int dummy = 1;
for (int w = 1; w < world.size(); w++){
mpi::request dum_req = world.isend(w, 14, dummy);
dum_req.wait();
}
zero_queue++;
}
} }
//Execute Task 1 //Execute Task 1
@ -498,7 +505,7 @@ AGGenInstance &AGGen::generate(bool batch_process, int batch_size, int numThrd,
//2 Node Edge case //2 Node Edge case
if(world.size() == 2){ if(world.size() == 2){
mpi::request tdone_req = world.isend(1, 2, 1); mpi::request tdone_req = world.isend(1, 2, 1);
tdone_req.wait(); tdone_req.wait();
//std::cout << "Node " << world.rank() << " sent finished message." << std::endl; //std::cout << "Node " << world.rank() << " sent finished message." << std::endl;
break; break;
} }
@ -506,7 +513,7 @@ AGGenInstance &AGGen::generate(bool batch_process, int batch_size, int numThrd,
else if(w < world.rank() || w > alloc+two_alloc) else if(w < world.rank() || w > alloc+two_alloc)
{ {
mpi::request tdone_req = world.isend(w, 2, 1); mpi::request tdone_req = world.isend(w, 2, 1);
tdone_req.wait(); tdone_req.wait();
} }
} }
@ -542,7 +549,7 @@ AGGenInstance &AGGen::generate(bool batch_process, int batch_size, int numThrd,
world.recv(mpi::any_source, 2, finished_signal); world.recv(mpi::any_source, 2, finished_signal);
//std::cout << "Receive message complete." << std::endl; //std::cout << "Receive message complete." << std::endl;
} }
} }
//If we get a new fact and new state, update //If we get a new fact and new state, update
if(world.iprobe(mpi::any_source, 3) && world.iprobe(mpi::any_source, 4)){ if(world.iprobe(mpi::any_source, 3) && world.iprobe(mpi::any_source, 4)){
@ -616,7 +623,7 @@ AGGenInstance &AGGen::generate(bool batch_process, int batch_size, int numThrd,
auto rem_state = localFrontier.front(); auto rem_state = localFrontier.front();
localFrontier.pop_front(); localFrontier.pop_front();
mpi::request rem_req = world.isend(send_check(world, alloc+two_alloc+1), 50, rem_state); mpi::request rem_req = world.isend(send_check(world, alloc+two_alloc+1), 50, rem_state);
rem_req.wait(); rem_req.wait();
} }
if (!localFrontier.empty()) if (!localFrontier.empty())
f_alpha = (static_cast<double>(localFrontier.size()) * (localFrontier.back().get_size()))/tot_sys_mem; f_alpha = (static_cast<double>(localFrontier.size()) * (localFrontier.back().get_size()))/tot_sys_mem;
@ -634,14 +641,17 @@ AGGenInstance &AGGen::generate(bool batch_process, int batch_size, int numThrd,
} }
} }
if(world.rank() == 0)
zero_queue--;
//std::cout << "Node " << world.rank() << " moving to next iter" << std::endl; //std::cout << "Node " << world.rank() << " moving to next iter" << std::endl;
} //while ends } //while ends
if(world.rank() == 0){ if(world.rank() == 0){
for (int w = 1; w < world.size(); w++){ for (int w = 1; w < world.size(); w++){
mpi::request proc_req = world.isend(w, 15, 1); mpi::request proc_req = world.isend(w, 15, 1);
proc_req.wait(); proc_req.wait();
} }
} }
if (mpi_exit == 1){ if (mpi_exit == 1){