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commit
4e6c4fbd8d
@ -48,19 +48,19 @@ cmake_force:
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SHELL = /bin/sh
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# The CMake executable.
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||||
CMAKE_COMMAND = /storage/home/nschrick/pkg/cmake/3.22.0/bin/cmake
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||||
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# The command to remove a file.
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RM = /usr/bin/cmake -E rm -f
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||||
RM = /storage/home/nschrick/pkg/cmake/3.22.0/bin/cmake -E rm -f
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# Escaping for special characters.
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# The top-level build directory on which CMake was run.
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CMAKE_BINARY_DIR = /home/nschrick/ag_parallel/build
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#=============================================================================
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# Targets provided globally by CMake.
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@ -68,7 +68,7 @@ CMAKE_BINARY_DIR = "/home/noah/Documents/School/Thesis Work/ag_parallel/build"
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# Special rule for the target edit_cache
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.PHONY : edit_cache
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@ -78,7 +78,7 @@ edit_cache/fast: edit_cache
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@ -87,9 +87,9 @@ rebuild_cache/fast: rebuild_cache
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# The main all target
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@ -155,19 +142,6 @@ decode/fast:
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@ -748,7 +698,6 @@ src/util/mem.o: src/util/mem.c.o
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@ -758,7 +707,6 @@ src/util/mem.i: src/util/mem.c.i
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@ -768,7 +716,6 @@ src/util/mem.s: src/util/mem.c.s
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src/util/redis_manager.o: src/util/redis_manager.cpp.o
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@ -908,10 +855,8 @@ help:
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@echo "... depend"
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@echo "... edit_cache"
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@echo "... rebuild_cache"
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@echo "... doc"
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@echo "... ag_gen"
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@ -954,9 +899,6 @@ help:
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@echo "... src/mpi/tasks.i"
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BIN
build/ag_gen
BIN
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Binary file not shown.
24
build/ag_run.sh
Executable file
24
build/ag_run.sh
Executable file
@ -0,0 +1,24 @@
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#!/usr/bin/env bash
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#SBATCH --job-name=ag_parallel_ser
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#SBATCH --error=./slurm_reports/job.%J.err
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#SBATCH --output=./slurm_reports/job.%J.out
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#SBATCH --nodes=2
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#SBATCH --mem=0
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#SBATCH --exclude=compute10
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export LD_LIBRARY_PATH=/home/nschrick/pkg/postgresql/12.4/lib
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#Argument for running test batches
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NUM_SERV=${1:-foo}
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TYPE=${2:-}
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CARS=${3:-}
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DBNAME=${4:-}
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module load graphviz
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module load gcc
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module load openmpi
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module load cmake
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module load postgresql/12.4
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./run.sh "$NUM_SERV" "$TYPE" "$CARS" "$DBNAME"
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@ -1,3 +1,14 @@
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#!/usr/bin/env bash
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if [ "$HOSTNAME" = "login" ]; then
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echo "Loading Modules."
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module load cmake
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module load gcc
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module load boost
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module load openmpi
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module load postgresql
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fi
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cmake -DCMAKE_BUILD_TYPE=Debug ../ -DCMAKE_EXPORT_COMPILE_COMMANDS=ON
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make ag_gen
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make decode
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@ -1,242 +1,232 @@
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"command": "/usr/bin/c++ -I/usr/include/postgresql -I\"/home/noah/Documents/School/Thesis Work/ag_parallel/src\" -std=c++14 -fopenmp -DREDIS -g -g -O0 -ggdb -Wall -fopenmp -pedantic -o CMakeFiles/decode.dir/src/util/common.cpp.o -c \"/home/noah/Documents/School/Thesis Work/ag_parallel/src/util/common.cpp\"",
|
||||
"file": "/home/noah/Documents/School/Thesis Work/ag_parallel/src/util/common.cpp"
|
||||
"directory": "/home/nschrick/ag_parallel/build",
|
||||
"command": "/opt/apps/gcc/8.2.0/bin/g++ -I/usr/include/postgresql -I/home/nschrick/pkg/boost/1.77.0/include -I/storage/home/nschrick/pkg/openmpi/4.1.2/include -I/home/nschrick/pkg/openmpi/4.1.2/include -I/home/nschrick/ag_parallel/src -std=c++14 -fopenmp -g -g -O0 -ggdb -Wall -fopenmp -pedantic -o CMakeFiles/decode.dir/src/util/common.cpp.o -c /home/nschrick/ag_parallel/src/util/common.cpp",
|
||||
"file": "/home/nschrick/ag_parallel/src/util/common.cpp"
|
||||
},
|
||||
{
|
||||
"directory": "/home/noah/Documents/School/Thesis Work/ag_parallel/build",
|
||||
"command": "/usr/bin/c++ -I/usr/include/postgresql -I\"/home/noah/Documents/School/Thesis Work/ag_parallel/src\" -std=c++14 -fopenmp -DREDIS -g -g -O0 -ggdb -Wall -fopenmp -pedantic -o CMakeFiles/decode.dir/src/util/db_functions.cpp.o -c \"/home/noah/Documents/School/Thesis Work/ag_parallel/src/util/db_functions.cpp\"",
|
||||
"file": "/home/noah/Documents/School/Thesis Work/ag_parallel/src/util/db_functions.cpp"
|
||||
"directory": "/home/nschrick/ag_parallel/build",
|
||||
"command": "/opt/apps/gcc/8.2.0/bin/g++ -I/usr/include/postgresql -I/home/nschrick/pkg/boost/1.77.0/include -I/storage/home/nschrick/pkg/openmpi/4.1.2/include -I/home/nschrick/pkg/openmpi/4.1.2/include -I/home/nschrick/ag_parallel/src -std=c++14 -fopenmp -g -g -O0 -ggdb -Wall -fopenmp -pedantic -o CMakeFiles/decode.dir/src/util/db_functions.cpp.o -c /home/nschrick/ag_parallel/src/util/db_functions.cpp",
|
||||
"file": "/home/nschrick/ag_parallel/src/util/db_functions.cpp"
|
||||
},
|
||||
{
|
||||
"directory": "/home/noah/Documents/School/Thesis Work/ag_parallel/build",
|
||||
"command": "/usr/bin/cc -I/usr/include/postgresql -I\"/home/noah/Documents/School/Thesis Work/ag_parallel/src\" -g -o CMakeFiles/decode.dir/src/util/hash.c.o -c \"/home/noah/Documents/School/Thesis Work/ag_parallel/src/util/hash.c\"",
|
||||
"file": "/home/noah/Documents/School/Thesis Work/ag_parallel/src/util/hash.c"
|
||||
"directory": "/home/nschrick/ag_parallel/build",
|
||||
"command": "/opt/apps/gcc/8.2.0/bin/gcc -I/usr/include/postgresql -I/home/nschrick/pkg/boost/1.77.0/include -I/storage/home/nschrick/pkg/openmpi/4.1.2/include -I/home/nschrick/pkg/openmpi/4.1.2/include -I/home/nschrick/ag_parallel/src -g -o CMakeFiles/decode.dir/src/util/hash.c.o -c /home/nschrick/ag_parallel/src/util/hash.c",
|
||||
"file": "/home/nschrick/ag_parallel/src/util/hash.c"
|
||||
},
|
||||
{
|
||||
"directory": "/home/noah/Documents/School/Thesis Work/ag_parallel/build",
|
||||
"command": "/usr/bin/cc -I/usr/include/postgresql -I\"/home/noah/Documents/School/Thesis Work/ag_parallel/src\" -g -o CMakeFiles/decode.dir/src/util/list.c.o -c \"/home/noah/Documents/School/Thesis Work/ag_parallel/src/util/list.c\"",
|
||||
"file": "/home/noah/Documents/School/Thesis Work/ag_parallel/src/util/list.c"
|
||||
"directory": "/home/nschrick/ag_parallel/build",
|
||||
"command": "/opt/apps/gcc/8.2.0/bin/gcc -I/usr/include/postgresql -I/home/nschrick/pkg/boost/1.77.0/include -I/storage/home/nschrick/pkg/openmpi/4.1.2/include -I/home/nschrick/pkg/openmpi/4.1.2/include -I/home/nschrick/ag_parallel/src -g -o CMakeFiles/decode.dir/src/util/list.c.o -c /home/nschrick/ag_parallel/src/util/list.c",
|
||||
"file": "/home/nschrick/ag_parallel/src/util/list.c"
|
||||
},
|
||||
{
|
||||
"directory": "/home/noah/Documents/School/Thesis Work/ag_parallel/build",
|
||||
"command": "/usr/bin/cc -I/usr/include/postgresql -I\"/home/noah/Documents/School/Thesis Work/ag_parallel/src\" -g -o CMakeFiles/decode.dir/src/util/mem.c.o -c \"/home/noah/Documents/School/Thesis Work/ag_parallel/src/util/mem.c\"",
|
||||
"file": "/home/noah/Documents/School/Thesis Work/ag_parallel/src/util/mem.c"
|
||||
"directory": "/home/nschrick/ag_parallel/build",
|
||||
"command": "/opt/apps/gcc/8.2.0/bin/gcc -I/usr/include/postgresql -I/home/nschrick/pkg/boost/1.77.0/include -I/storage/home/nschrick/pkg/openmpi/4.1.2/include -I/home/nschrick/pkg/openmpi/4.1.2/include -I/home/nschrick/ag_parallel/src -g -o CMakeFiles/decode.dir/src/util/mem.c.o -c /home/nschrick/ag_parallel/src/util/mem.c",
|
||||
"file": "/home/nschrick/ag_parallel/src/util/mem.c"
|
||||
},
|
||||
{
|
||||
"directory": "/home/noah/Documents/School/Thesis Work/ag_parallel/build",
|
||||
"command": "/usr/bin/c++ -I/usr/include/postgresql -I\"/home/noah/Documents/School/Thesis Work/ag_parallel/src\" -std=c++14 -fopenmp -DREDIS -g -g -O0 -ggdb -Wall -fopenmp -pedantic -o CMakeFiles/decode.dir/src/util/redis_manager.cpp.o -c \"/home/noah/Documents/School/Thesis Work/ag_parallel/src/util/redis_manager.cpp\"",
|
||||
"file": "/home/noah/Documents/School/Thesis Work/ag_parallel/src/util/redis_manager.cpp"
|
||||
"directory": "/home/nschrick/ag_parallel/build",
|
||||
"command": "/opt/apps/gcc/8.2.0/bin/g++ -I/usr/include/postgresql -I/home/nschrick/pkg/boost/1.77.0/include -I/storage/home/nschrick/pkg/openmpi/4.1.2/include -I/home/nschrick/pkg/openmpi/4.1.2/include -I/home/nschrick/ag_parallel/src -std=c++14 -fopenmp -g -g -O0 -ggdb -Wall -fopenmp -pedantic -o CMakeFiles/decode.dir/src/util/redis_manager.cpp.o -c /home/nschrick/ag_parallel/src/util/redis_manager.cpp",
|
||||
"file": "/home/nschrick/ag_parallel/src/util/redis_manager.cpp"
|
||||
},
|
||||
{
|
||||
"directory": "/home/noah/Documents/School/Thesis Work/ag_parallel/build",
|
||||
"command": "/usr/bin/cc -I/usr/include/postgresql -I\"/home/noah/Documents/School/Thesis Work/ag_parallel/src\" -g -o CMakeFiles/decode.dir/src/util/str_array.c.o -c \"/home/noah/Documents/School/Thesis Work/ag_parallel/src/util/str_array.c\"",
|
||||
"file": "/home/noah/Documents/School/Thesis Work/ag_parallel/src/util/str_array.c"
|
||||
"directory": "/home/nschrick/ag_parallel/build",
|
||||
"command": "/opt/apps/gcc/8.2.0/bin/gcc -I/usr/include/postgresql -I/home/nschrick/pkg/boost/1.77.0/include -I/storage/home/nschrick/pkg/openmpi/4.1.2/include -I/home/nschrick/pkg/openmpi/4.1.2/include -I/home/nschrick/ag_parallel/src -g -o CMakeFiles/decode.dir/src/util/str_array.c.o -c /home/nschrick/ag_parallel/src/util/str_array.c",
|
||||
"file": "/home/nschrick/ag_parallel/src/util/str_array.c"
|
||||
},
|
||||
{
|
||||
"directory": "/home/noah/Documents/School/Thesis Work/ag_parallel/build",
|
||||
"command": "/usr/bin/cc -I/usr/include/postgresql -I\"/home/noah/Documents/School/Thesis Work/ag_parallel/src\" -g -o CMakeFiles/decode.dir/src/util/vector.c.o -c \"/home/noah/Documents/School/Thesis Work/ag_parallel/src/util/vector.c\"",
|
||||
"file": "/home/noah/Documents/School/Thesis Work/ag_parallel/src/util/vector.c"
|
||||
},
|
||||
{
|
||||
"directory": "/home/noah/Documents/School/Thesis Work/ag_parallel/build",
|
||||
"command": "/usr/bin/cc -I/usr/include/postgresql -I\"/home/noah/Documents/School/Thesis Work/ag_parallel/src\" -g -o CMakeFiles/dynstr_test.dir/src/util/mem.c.o -c \"/home/noah/Documents/School/Thesis Work/ag_parallel/src/util/mem.c\"",
|
||||
"file": "/home/noah/Documents/School/Thesis Work/ag_parallel/src/util/mem.c"
|
||||
},
|
||||
{
|
||||
"directory": "/home/noah/Documents/School/Thesis Work/ag_parallel/build",
|
||||
"command": "/usr/bin/cc -I/usr/include/postgresql -I\"/home/noah/Documents/School/Thesis Work/ag_parallel/src\" -g -o CMakeFiles/dynstr_test.dir/src/tests/mem_test.c.o -c \"/home/noah/Documents/School/Thesis Work/ag_parallel/src/tests/mem_test.c\"",
|
||||
"file": "/home/noah/Documents/School/Thesis Work/ag_parallel/src/tests/mem_test.c"
|
||||
"directory": "/home/nschrick/ag_parallel/build",
|
||||
"command": "/opt/apps/gcc/8.2.0/bin/gcc -I/usr/include/postgresql -I/home/nschrick/pkg/boost/1.77.0/include -I/storage/home/nschrick/pkg/openmpi/4.1.2/include -I/home/nschrick/pkg/openmpi/4.1.2/include -I/home/nschrick/ag_parallel/src -g -o CMakeFiles/decode.dir/src/util/vector.c.o -c /home/nschrick/ag_parallel/src/util/vector.c",
|
||||
"file": "/home/nschrick/ag_parallel/src/util/vector.c"
|
||||
}
|
||||
]
|
||||
BIN
build/decode
BIN
build/decode
Binary file not shown.
56
build/run.sh
56
build/run.sh
@ -1,27 +1,57 @@
|
||||
#!/usr/bin/env bash
|
||||
|
||||
DBNAME="testing4"
|
||||
#Optional Arguments for running batches of tests
|
||||
NUM_SERV=${1:-foo}
|
||||
TYPE=${2:-foo2}
|
||||
CARS=${3:-foo3}
|
||||
DBNAME=${4:-foo4}
|
||||
|
||||
if sudo -u postgres -i sh -c "psql -q ${DBNAME} -c '\q'" 2>&1; then
|
||||
strval1="sync"
|
||||
strval2="non-sync"
|
||||
|
||||
if [ "$HOSTNAME" = "login" ]; then
|
||||
#Database stored on node with port
|
||||
if psql -p 5240 -h login ${DBNAME} -c '\q' 2>&1; then
|
||||
echo "Database ${DBNAME} exists. Dropping and recreating from dump."
|
||||
sudo -u postgres -i sh -c "dropdb "$DBNAME"" || true
|
||||
sudo -u postgres -i sh -c "createdb "$DBNAME" ag_gen"
|
||||
|
||||
psql -p 5240 -h login postgres -c "DROP DATABASE "$DBNAME""
|
||||
psql -p 5240 -h login postgres -c "CREATE DATABASE "$DBNAME" WITH OWNER = ag_gen"
|
||||
psql -q -p 5240 -h login "$DBNAME" < schema.sql
|
||||
else
|
||||
echo "Database ${DBNAME} does not exist. Creating and importing from dump."
|
||||
|
||||
psql -p 5240 -h login postgres -c "CREATE DATABASE "$DBNAME" WITH OWNER = ag_gen"
|
||||
psql -q -p 5240 -h login "$DBNAME" < schema.sql
|
||||
fi
|
||||
else
|
||||
if psql ${DBNAME} -c '\q' 2>&1; then
|
||||
echo "Database ${DBNAME} exists. Dropping and recreating from dump."
|
||||
|
||||
psql postgres -c "DROP DATABASE "$DBNAME""
|
||||
psql postgres -c "CREATE DATABASE "$DBNAME" WITH OWNER = ag_gen"
|
||||
psql -q "$DBNAME" < schema.sql
|
||||
else
|
||||
echo "Database ${DBNAME} does not exist. Creating and importing from dump."
|
||||
sudo -u postgres -i sh -c "createdb "$DBNAME" ag_gen"
|
||||
|
||||
psql postgres -c "CREATE DATABASE "$DBNAME" WITH OWNER = ag_gen"
|
||||
psql -q "$DBNAME" < schema.sql
|
||||
fi
|
||||
|
||||
#sudo -u postgres -i sh -c "dropdb ag_gen" || true
|
||||
#sudo -u postgres -i sh -c "createdb ag_gen ag_gen"
|
||||
#psql ag_gen < schema.sql
|
||||
fi
|
||||
|
||||
#./ag_gen -n ../car_examples/generic_timeline_maintenance.nm -x ../car_examples/tmp.xp -g DOTFILE.dot -t 1 -q 1
|
||||
#./ag_gen -n ../car_examples/generic_maintenance.nm -x ../car_examples/generic_maintenance.xp -g DOTFILE.dot -t 1 -q 1
|
||||
./ag_gen -n ../fpga_examples/Network_1/car_network1.nm -x ../fpga_examples/Network_1/car_network1.xp -g DOTFILE.dot -t 1 -q 1 -p -a .20 -m 1 -z "$DBNAME"
|
||||
#./ag_gen -n ../car_examples/generic_timeline_maintenance.nm -x ../car_examples/sync_timeline_maintenance.xp -g DOTFILE.dot -t 1 -q 1
|
||||
#./ag_gen -n ../fpga_examples/Network_5/car_network5.nm -x ../fpga_examples/Network_5/car_network5.xp -g DOTFILE.dot -t 1 -q 1
|
||||
|
||||
if [ "$TYPE" == "$strval1" ]; then
|
||||
#./ag_gen -n ../Feb_2021/generic_timeline_maintenance.nm -x ../Feb_2021/Sync/"$NUM_SERV"_Serv/sync_timeline_maintenance.xp -g DOTFILE.dot -t 1 -q 1 -p -a 0.9
|
||||
./ag_gen -n ../Oct_2021/nm_files/"$CARS"_car_timeline_maintenance.nm -x ../Oct_2021/Sync/4_Exploits/"$NUM_SERV"_Serv/sync_timeline_maintenance.xp -t 1 -q 1 -p -a 0.6 -z "$DBNAME"
|
||||
fi
|
||||
|
||||
if [ "$TYPE" == "$strval2" ]; then
|
||||
#./ag_gen -n ../Feb_2021/generic_timeline_maintenance.nm -x ../Feb_2021/Non_Sync/"$NUM_SERV"_Serv/generic_timeline_maintenance.xp -g DOTFILE.dot -t 1 -q 1 -p -a 0.9
|
||||
mpirun --mca btl tcp,self --mca btl_tcp_if_include eth0 ./ag_gen -n ../Oct_2021/nm_files/"$CARS"_car_timeline_maintenance.nm -x ../Oct_2021/Non_Sync/4_Exploits/"$NUM_SERV"_Serv/generic_timeline_maintenance.xp -t 1 -q 1 -p -a 0.6 -z "$DBNAME" -m 2
|
||||
fi
|
||||
|
||||
# python3 ../tools/color_code.py ../build/states.txt DOTFILE.dot new.dot
|
||||
#dot -Tsvg new.dot > ag.svg
|
||||
dot -Tsvg DOTFILE.dot > ag.svg
|
||||
|
||||
#dot -Tsvg DOTFILE.dot > ag.svg
|
||||
|
||||
Loading…
x
Reference in New Issue
Block a user